Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 19:46661564-46978580

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69 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sluc1 19 36039544 to 46773082 10733538 QTL susceptibility to lung cancer 1
Gm36602 19 46658967 to 46666126 7159 - lincRNA gene predicted gene, 36602
Cyp17a1 19 46667165 to 46673000 5835 - protein coding gene cytochrome P450, family 17, subfamily a, polypeptide 1
Tssr156800 19 46668587 to 46668603 16 + TSS region transcription start site region 156800
Gm41857 19 46668680 to 46676083 7403 + lncRNA gene predicted gene, 41857
Tssr156801 19 46669272 to 46669274 2 + TSS region transcription start site region 156801
Tssr159659 19 46670711 to 46670721 10 - TSS region transcription start site region 159659
Tssr159660 19 46672883 to 46672900 17 - TSS region transcription start site region 159660
Tssr159661 19 46673063 to 46673072 9 - TSS region transcription start site region 159661
Gm6967 19 46674273 to 46675279 1006 - pseudogene predicted gene 6967
Tssr159662 19 46675344 to 46675354 10 - TSS region transcription start site region 159662
Cpgi11010 19 46689691 to 46690352 661 CpG island CpG island 11010
Tssr156802 19 46689902 to 46689943 41 + TSS region transcription start site region 156802
Borcs7 19 46689906 to 46703382 13476 + protein coding gene BLOC-1 related complex subunit 7
Tssr159663 19 46690138 to 46690173 35 - TSS region transcription start site region 159663
Tssr159664 19 46701344 to 46701383 39 - TSS region transcription start site region 159664
Cpgi11011 19 46707339 to 46707628 289 CpG island CpG island 11011
Tssr156803 19 46707449 to 46707511 62 + TSS region transcription start site region 156803
As3mt 19 46707458 to 46741099 33641 + protein coding gene arsenic (+3 oxidation state) methyltransferase
Tssr156804 19 46707658 to 46707708 50 + TSS region transcription start site region 156804
Tssr156805 19 46707721 to 46707732 11 + TSS region transcription start site region 156805
Tssr156806 19 46707735 to 46707758 23 + TSS region transcription start site region 156806
Gm10199 19 46760439 to 46763466 3027 unclassified gene predicted gene 10199
Cpgi11012 19 46760765 to 46763322 2557 CpG island CpG island 11012
Tssr159665 19 46761201 to 46761215 14 - TSS region transcription start site region 159665
Tssr159666 19 46761248 to 46761263 15 - TSS region transcription start site region 159666
Tssr156807 19 46761402 to 46761416 14 + TSS region transcription start site region 156807
Cnnm2 19 46761564 to 46878580 117016 + protein coding gene cyclin M2
Tssr156808 19 46761578 to 46761618 40 + TSS region transcription start site region 156808
Tssr156809 19 46761627 to 46761638 11 + TSS region transcription start site region 156809
Tssr156810 19 46761639 to 46761656 17 + TSS region transcription start site region 156810
Tssr156811 19 46761827 to 46761849 22 + TSS region transcription start site region 156811
Tssr156812 19 46763427 to 46763431 4 + TSS region transcription start site region 156812
Tssr156813 19 46772410 to 46772421 11 + TSS region transcription start site region 156813
D19Mit9 19 46772962 to 46773082 120 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 9
Tssr156814 19 46819495 to 46819538 43 + TSS region transcription start site region 156814
Tssr156815 19 46846848 to 46846860 12 + TSS region transcription start site region 156815
Tssr159667 19 46863537 to 46863550 13 - TSS region transcription start site region 159667
Tssr159668 19 46863556 to 46863569 13 - TSS region transcription start site region 159668
Tssr159669 19 46863640 to 46863653 13 - TSS region transcription start site region 159669
Tssr156816 19 46863885 to 46863894 9 + TSS region transcription start site region 156816
Tssr156817 19 46863903 to 46863922 19 + TSS region transcription start site region 156817
Tssr159670 19 46864233 to 46864280 47 - TSS region transcription start site region 159670
Tssr5541 19 46868971 to 46868993 22 - TSS region transcription start site region 5541
Gm50431 19 46881495 to 46883439 1944 + lincRNA gene predicted gene, 50431
A930026I22Rik 19 46882356 to 46883973 1617 unclassified gene RIKEN cDNA A930026I22 gene
Nt5c2 19 46885390 to 47015189 129799 - protein coding gene 5'-nucleotidase, cytosolic II
Gm9751 19 46889007 to 46909574 20567 unclassified gene predicted gene 9751
Tssr159671 19 46901467 to 46901471 4 - TSS region transcription start site region 159671
Tssr159672 19 46908645 to 46908649 4 - TSS region transcription start site region 159672
Gm18490 19 46920507 to 46921270 763 - pseudogene predicted gene, 18490
Tssr159673 19 46925558 to 46925562 4 - TSS region transcription start site region 159673
Tssr159674 19 46929222 to 46929227 5 - TSS region transcription start site region 159674
Tssr159675 19 46932298 to 46932302 4 - TSS region transcription start site region 159675
Tssr159676 19 46941035 to 46941044 9 - TSS region transcription start site region 159676
Tssr159677 19 46943938 to 46943955 17 - TSS region transcription start site region 159677
Tssr159678 19 46946642 to 46946661 19 - TSS region transcription start site region 159678
Cpgi11013 19 46961542 to 46962659 1117 CpG island CpG island 11013
Tssr156818 19 46961808 to 46961820 12 + TSS region transcription start site region 156818
Tssr159679 19 46961876 to 46961895 19 - TSS region transcription start site region 159679
Tssr159680 19 46961916 to 46961930 14 - TSS region transcription start site region 159680
Tssr159681 19 46961936 to 46961972 36 - TSS region transcription start site region 159681
Tssr159682 19 46962301 to 46962317 16 - TSS region transcription start site region 159682
Tssr159683 19 46962325 to 46962333 8 - TSS region transcription start site region 159683
Tssr159684 19 46962509 to 46962579 70 - TSS region transcription start site region 159684
Tssr156819 19 46962658 to 46962699 41 + TSS region transcription start site region 156819
Tssr159685 19 46969540 to 46969555 15 - TSS region transcription start site region 159685
Tssr159686 19 46969562 to 46969572 10 - TSS region transcription start site region 159686
D19Dcr36 19 46970236 to 46970333 97 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 36