Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:46502599-46643925

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi11004 19 46500770 to 46503221 2451 CpG island CpG island 11004
Gm9798 19 46501647 to 46502781 1134 unclassified gene predicted gene 9798
Trim8 19 46501648 to 46516444 14796 + protein coding gene tripartite motif-containing 8
Tssr156774 19 46502880 to 46502912 32 + TSS region transcription start site region 156774
Tssr159652 19 46502936 to 46502950 14 - TSS region transcription start site region 159652
Tssr159653 19 46503676 to 46503696 20 - TSS region transcription start site region 159653
Tssr156775 19 46511154 to 46511158 4 + TSS region transcription start site region 156775
Tssr156776 19 46514616 to 46514631 15 + TSS region transcription start site region 156776
Cpgi11005 19 46515013 to 46515667 654 CpG island CpG island 11005
Tssr156777 19 46515322 to 46515340 18 + TSS region transcription start site region 156777
Tssr156778 19 46515714 to 46515762 48 + TSS region transcription start site region 156778
Tssr156779 19 46515839 to 46515856 17 + TSS region transcription start site region 156779
Tssr156780 19 46516153 to 46516179 26 + TSS region transcription start site region 156780
Tssr156781 19 46516187 to 46516203 16 + TSS region transcription start site region 156781
Tssr156782 19 46516253 to 46516309 56 + TSS region transcription start site region 156782
Cpgi11006 19 46528646 to 46529024 378 CpG island CpG island 11006
Arl3 19 46531109 to 46573085 41976 - protein coding gene ADP-ribosylation factor-like 3
Tssr159654 19 46558297 to 46558333 36 - TSS region transcription start site region 159654
Tssr5538 19 46558774 to 46558800 26 - TSS region transcription start site region 5538
Cpgi11007 19 46572599 to 46573925 1326 CpG island CpG island 11007
Tssr159655 19 46573059 to 46573082 23 - TSS region transcription start site region 159655
Tssr159656 19 46573096 to 46573207 111 - TSS region transcription start site region 159656
Tssr156783 19 46573362 to 46573421 59 + TSS region transcription start site region 156783
Sfxn2 19 46573365 to 46596898 23533 + protein coding gene sideroflexin 2
Tssr156784 19 46573422 to 46573436 14 + TSS region transcription start site region 156784
Tssr156785 19 46595123 to 46595126 3 + TSS region transcription start site region 156785
Cpgi11008 19 46598830 to 46599689 859 CpG island CpG island 11008
Tssr156786 19 46599081 to 46599150 69 + TSS region transcription start site region 156786
Wbp1l 19 46599106 to 46657389 58283 + protein coding gene WW domain binding protein 1 like
Tssr156787 19 46599152 to 46599178 26 + TSS region transcription start site region 156787
Tssr156788 19 46612485 to 46612494 9 + TSS region transcription start site region 156788
Tssr156789 19 46618647 to 46618653 6 + TSS region transcription start site region 156789
Cpgi11009 19 46618961 to 46619263 302 CpG island CpG island 11009
Tssr159657 19 46619960 to 46619970 10 - TSS region transcription start site region 159657
Tssr159658 19 46619971 to 46620001 30 - TSS region transcription start site region 159658
Tssr156790 19 46623387 to 46623451 64 + TSS region transcription start site region 156790
Tssr156791 19 46624370 to 46624386 16 + TSS region transcription start site region 156791
Tssr5539 19 46635823 to 46635831 8 + TSS region transcription start site region 5539