Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 19:46376896-46508804

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41 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Actr1a 19 46376814 to 46395735 18921 - protein coding gene ARP1 actin-related protein 1A, centractin alpha
Tssr159646 19 46377994 to 46378024 30 - TSS region transcription start site region 159646
Tssr159647 19 46378151 to 46378196 45 - TSS region transcription start site region 159647
Tssr159648 19 46379473 to 46379477 4 - TSS region transcription start site region 159648
Tssr159649 19 46380965 to 46380969 4 - TSS region transcription start site region 159649
Cpgi11001 19 46394827 to 46395902 1075 CpG island CpG island 11001
Tssr156751 19 46395353 to 46395365 12 + TSS region transcription start site region 156751
Tssr156752 19 46395374 to 46395393 19 + TSS region transcription start site region 156752
Tssr159650 19 46395722 to 46395756 34 - TSS region transcription start site region 159650
Cpgi11002 19 46396690 to 46397425 735 CpG island CpG island 11002
Tssr156753 19 46396885 to 46396999 114 + TSS region transcription start site region 156753
Sufu 19 46396896 to 46488804 91908 + protein coding gene SUFU negative regulator of hedgehog signaling
Tssr156754 19 46397009 to 46397033 24 + TSS region transcription start site region 156754
9430020M11Rik 19 46426854 to 46427655 801 lncRNA gene RIKEN cDNA 9430020M11 gene
Tssr156755 19 46454693 to 46454705 12 + TSS region transcription start site region 156755
Tssr156756 19 46463942 to 46463944 2 + TSS region transcription start site region 156756
Cpgi11003 19 46499809 to 46500513 704 CpG island CpG island 11003
Tssr156757 19 46500042 to 46500056 14 + TSS region transcription start site region 156757
Tssr156758 19 46500167 to 46500197 30 + TSS region transcription start site region 156758
Tssr156759 19 46500201 to 46500230 29 + TSS region transcription start site region 156759
Tssr156760 19 46500234 to 46500259 25 + TSS region transcription start site region 156760
Tssr156761 19 46500611 to 46500651 40 + TSS region transcription start site region 156761
Tssr156762 19 46500756 to 46500770 14 + TSS region transcription start site region 156762
Cpgi11004 19 46500770 to 46503221 2451 CpG island CpG island 11004
Tssr156763 19 46500826 to 46500837 11 + TSS region transcription start site region 156763
Tssr159651 19 46500940 to 46500945 5 - TSS region transcription start site region 159651
Tssr156764 19 46500988 to 46501000 12 + TSS region transcription start site region 156764
Tssr156765 19 46501167 to 46501197 30 + TSS region transcription start site region 156765
Tssr156766 19 46501431 to 46501471 40 + TSS region transcription start site region 156766
Gm9798 19 46501647 to 46502781 1134 unclassified gene predicted gene 9798
Tssr156767 19 46501664 to 46501675 11 + TSS region transcription start site region 156767
Tssr156768 19 46501685 to 46501707 22 + TSS region transcription start site region 156768
Trim8 19 46501702 to 46516848 15146 + protein coding gene tripartite motif-containing 8
Tssr156769 19 46501715 to 46501733 18 + TSS region transcription start site region 156769
Tssr156770 19 46501738 to 46501773 35 + TSS region transcription start site region 156770
Tssr156771 19 46501790 to 46501802 12 + TSS region transcription start site region 156771
Tssr156772 19 46501812 to 46501832 20 + TSS region transcription start site region 156772
Tssr156773 19 46502290 to 46502325 35 + TSS region transcription start site region 156773
Tssr156774 19 46502880 to 46502912 32 + TSS region transcription start site region 156774
Tssr159652 19 46502936 to 46502950 14 - TSS region transcription start site region 159652
Tssr159653 19 46503676 to 46503696 20 - TSS region transcription start site region 159653