Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:46340353-46450365

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm36493 19 46338776 to 46344131 5355 + lncRNA gene predicted gene, 36493
Tssr156747 19 46341118 to 46341122 4 + TSS region transcription start site region 156747
Mir146b 19 46342762 to 46342870 108 + miRNA gene microRNA 146b
2310034G01Rik 19 46348201 to 46348988 787 - lincRNA gene RIKEN cDNA 2310034G01 gene
Cpgi10998 19 46348591 to 46349916 1325 CpG island CpG island 10998
Tssr159644 19 46348968 to 46349001 33 - TSS region transcription start site region 159644
Tssr5536 19 46349043 to 46349103 60 + TSS region transcription start site region 5536
Tssr159645 19 46350246 to 46350279 33 - TSS region transcription start site region 159645
Cpgi10999 19 46356701 to 46357138 437 CpG island CpG island 10999
Mfsd13a 19 46356877 to 46375254 18377 + protein coding gene major facilitator superfamily domain containing 13a
Tssr156748 19 46356897 to 46356942 45 + TSS region transcription start site region 156748
Tssr5537 19 46356946 to 46356949 3 + TSS region transcription start site region 5537
Gm24610 19 46359036 to 46359144 108 + snoRNA gene predicted gene, 24610
Cpgi11000 19 46367871 to 46368254 383 CpG island CpG island 11000
Tssr156749 19 46367978 to 46367988 10 + TSS region transcription start site region 156749
Tssr156750 19 46369252 to 46369277 25 + TSS region transcription start site region 156750
Actr1a 19 46376814 to 46395735 18921 - protein coding gene ARP1 actin-related protein 1A, centractin alpha
Tssr159646 19 46377994 to 46378024 30 - TSS region transcription start site region 159646
Tssr159647 19 46378151 to 46378196 45 - TSS region transcription start site region 159647
Tssr159648 19 46379473 to 46379477 4 - TSS region transcription start site region 159648
Tssr159649 19 46380965 to 46380969 4 - TSS region transcription start site region 159649
Cpgi11001 19 46394827 to 46395902 1075 CpG island CpG island 11001
Tssr156751 19 46395353 to 46395365 12 + TSS region transcription start site region 156751
Tssr156752 19 46395374 to 46395393 19 + TSS region transcription start site region 156752
Tssr159650 19 46395722 to 46395756 34 - TSS region transcription start site region 159650
Cpgi11002 19 46396690 to 46397425 735 CpG island CpG island 11002
Tssr156753 19 46396885 to 46396999 114 + TSS region transcription start site region 156753
Sufu 19 46396896 to 46488804 91908 + protein coding gene SUFU negative regulator of hedgehog signaling
Tssr156754 19 46397009 to 46397033 24 + TSS region transcription start site region 156754
9430020M11Rik 19 46426854 to 46427655 801 unclassified gene RIKEN cDNA 9430020M11 gene