Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:46127509-46311510

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
In(19Fgf8-Pitx3)1Fsp 19 45736798 to 46148326 411528 chromosomal inversion inversion, Chr 19, Francois Spitz 1
Tssr156716 19 46131888 to 46131904 16 + TSS region transcription start site region 156716
Elovl3 19 46131897 to 46135307 3410 + protein coding gene elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 3
Cpgi10985 19 46135393 to 46137551 2158 CpG island CpG island 10985
Pitx3 19 46135685 to 46148326 12641 - protein coding gene paired-like homeodomain transcription factor 3
Cpgi10986 19 46147388 to 46148966 1578 CpG island CpG island 10986
Tssr159609 19 46148249 to 46148255 6 - TSS region transcription start site region 159609
Tssr159610 19 46148369 to 46148386 17 - TSS region transcription start site region 159610
Cpgi10987 19 46152247 to 46152918 671 CpG island CpG island 10987
Tssr156717 19 46152505 to 46152514 9 + TSS region transcription start site region 156717
Gbf1 19 46152509 to 46286510 134001 + protein coding gene golgi-specific brefeldin A-resistance factor 1
Tssr156718 19 46152523 to 46152566 43 + TSS region transcription start site region 156718
D430033H22Rik 19 46180482 to 46185808 5326 unclassified gene RIKEN cDNA D430033H22 gene
Tssr159611 19 46186827 to 46186833 6 - TSS region transcription start site region 159611
Gm8974 19 46205380 to 46205858 478 - pseudogene predicted gene 8974
C130013I19Rik 19 46213098 to 46215984 2886 unclassified gene RIKEN cDNA C130013I19 gene
Tssr156719 19 46219733 to 46219734 1 + TSS region transcription start site region 156719
Tssr156720 19 46227826 to 46227830 4 + TSS region transcription start site region 156720
Gm16726 19 46264539 to 46267669 3130 - unclassified non-coding RNA gene predicted gene, 16726
Tssr159612 19 46267674 to 46267702 28 - TSS region transcription start site region 159612
Tssr159613 19 46267708 to 46267715 7 - TSS region transcription start site region 159613
Tssr5535 19 46267835 to 46267838 3 + TSS region transcription start site region 5535
Tssr156721 19 46267841 to 46267852 11 + TSS region transcription start site region 156721
4833438C02Rik 19 46303590 to 46305623 2033 - unclassified non-coding RNA gene RIKEN cDNA 4833438C02 gene
Cpgi10988 19 46304215 to 46306128 1913 CpG island CpG island 10988
Tssr156722 19 46304390 to 46304406 16 + TSS region transcription start site region 156722
Tssr159614 19 46304542 to 46304564 22 - TSS region transcription start site region 159614
Tssr159615 19 46304604 to 46304605 1 - TSS region transcription start site region 159615
Tssr159616 19 46304626 to 46304640 14 - TSS region transcription start site region 159616
Tssr156723 19 46304709 to 46304811 102 + TSS region transcription start site region 156723
Nfkb2 19 46304737 to 46312090 7353 + protein coding gene nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100
Tssr156724 19 46304830 to 46304839 9 + TSS region transcription start site region 156724
Tssr159617 19 46305291 to 46305303 12 - TSS region transcription start site region 159617
Tssr159618 19 46305564 to 46305575 11 - TSS region transcription start site region 159618
Tssr159619 19 46305579 to 46305627 48 - TSS region transcription start site region 159619
Tssr156725 19 46305682 to 46305741 59 + TSS region transcription start site region 156725
Tssr156726 19 46305745 to 46305787 42 + TSS region transcription start site region 156726
Tssr156727 19 46305856 to 46305870 14 + TSS region transcription start site region 156727
Tssr156728 19 46305884 to 46305907 23 + TSS region transcription start site region 156728
Tssr156729 19 46305909 to 46305927 18 + TSS region transcription start site region 156729
Tssr156730 19 46305943 to 46305961 18 + TSS region transcription start site region 156730
Tssr156731 19 46305972 to 46305981 9 + TSS region transcription start site region 156731
Tssr156732 19 46306023 to 46306032 9 + TSS region transcription start site region 156732
Tssr156733 19 46306093 to 46306109 16 + TSS region transcription start site region 156733
Tssr156734 19 46306117 to 46306154 37 + TSS region transcription start site region 156734
Tssr156735 19 46306160 to 46306171 11 + TSS region transcription start site region 156735
Tssr156736 19 46306243 to 46306255 12 + TSS region transcription start site region 156736
Tssr156737 19 46306258 to 46306263 5 + TSS region transcription start site region 156737
Tssr156738 19 46307351 to 46307373 22 + TSS region transcription start site region 156738
Tssr156739 19 46308224 to 46308231 7 + TSS region transcription start site region 156739
Cpgi10989 19 46308291 to 46308575 284 CpG island CpG island 10989
Cpgi10990 19 46308665 to 46309434 769 CpG island CpG island 10990
Tssr156740 19 46308835 to 46308846 11 + TSS region transcription start site region 156740
Cpgi10991 19 46309702 to 46310015 313 CpG island CpG island 10991
Tssr156741 19 46310205 to 46310230 25 + TSS region transcription start site region 156741
Tssr156742 19 46310302 to 46310317 15 + TSS region transcription start site region 156742