Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:46105380-46305858

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
In(19Fgf8-Pitx3)1Fsp 19 45736798 to 46148326 411528 chromosomal inversion inversion, Chr 19, Francois Spitz 1
Tssr156715 19 46108931 to 46108944 13 + TSS region transcription start site region 156715
A013 19 46124828 to 46125019 191 DNA segment DNA segment, A013
Tssr156716 19 46131888 to 46131904 16 + TSS region transcription start site region 156716
Elovl3 19 46131897 to 46135307 3410 + protein coding gene elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 3
Cpgi10985 19 46135393 to 46137551 2158 CpG island CpG island 10985
Pitx3 19 46135685 to 46148326 12641 - protein coding gene paired-like homeodomain transcription factor 3
Cpgi10986 19 46147388 to 46148966 1578 CpG island CpG island 10986
Tssr159609 19 46148249 to 46148255 6 - TSS region transcription start site region 159609
Tssr159610 19 46148369 to 46148386 17 - TSS region transcription start site region 159610
Cpgi10987 19 46152247 to 46152918 671 CpG island CpG island 10987
Tssr156717 19 46152505 to 46152514 9 + TSS region transcription start site region 156717
Gbf1 19 46152509 to 46286510 134001 + protein coding gene golgi-specific brefeldin A-resistance factor 1
Tssr156718 19 46152523 to 46152566 43 + TSS region transcription start site region 156718
D430033H22Rik 19 46180482 to 46185808 5326 unclassified gene RIKEN cDNA D430033H22 gene
Tssr159611 19 46186827 to 46186833 6 - TSS region transcription start site region 159611
Gm8974 19 46205380 to 46205858 478 - pseudogene predicted gene 8974
C130013I19Rik 19 46213098 to 46215984 2886 unclassified gene RIKEN cDNA C130013I19 gene
Tssr156719 19 46219733 to 46219734 1 + TSS region transcription start site region 156719
Tssr156720 19 46227826 to 46227830 4 + TSS region transcription start site region 156720
Gm16726 19 46264539 to 46267669 3130 - unclassified non-coding RNA gene predicted gene, 16726
Tssr159612 19 46267674 to 46267702 28 - TSS region transcription start site region 159612
Tssr159613 19 46267708 to 46267715 7 - TSS region transcription start site region 159613
Tssr5535 19 46267835 to 46267838 3 + TSS region transcription start site region 5535
Tssr156721 19 46267841 to 46267852 11 + TSS region transcription start site region 156721
4833438C02Rik 19 46303590 to 46305623 2033 - unclassified non-coding RNA gene RIKEN cDNA 4833438C02 gene
Cpgi10988 19 46304215 to 46306128 1913 CpG island CpG island 10988
Tssr156722 19 46304390 to 46304406 16 + TSS region transcription start site region 156722
Tssr159614 19 46304542 to 46304564 22 - TSS region transcription start site region 159614
Tssr159615 19 46304604 to 46304605 1 - TSS region transcription start site region 159615
Tssr159616 19 46304626 to 46304640 14 - TSS region transcription start site region 159616
Tssr156723 19 46304709 to 46304811 102 + TSS region transcription start site region 156723
Nfkb2 19 46304737 to 46312090 7353 + protein coding gene nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100
Tssr156724 19 46304830 to 46304839 9 + TSS region transcription start site region 156724
Tssr159617 19 46305291 to 46305303 12 - TSS region transcription start site region 159617
Tssr159618 19 46305564 to 46305575 11 - TSS region transcription start site region 159618
Tssr159619 19 46305579 to 46305627 48 - TSS region transcription start site region 159619
Tssr156725 19 46305682 to 46305741 59 + TSS region transcription start site region 156725
Tssr156726 19 46305745 to 46305787 42 + TSS region transcription start site region 156726
Tssr156727 19 46305856 to 46305870 14 + TSS region transcription start site region 156727