Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:46073098-46355984

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115 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
In(19Fgf8-Pitx3)1Fsp 19 45736798 to 46148326 411528 chromosomal inversion inversion, Chr 19, Francois Spitz 1
Cpgi10984 19 46075540 to 46076506 966 CpG island CpG island 10984
Tssr156709 19 46075842 to 46075859 17 + TSS region transcription start site region 156709
Nolc1 19 46075863 to 46085530 9667 + protein coding gene nucleolar and coiled-body phosphoprotein 1
Tssr156710 19 46075939 to 46075946 7 + TSS region transcription start site region 156710
Tssr156711 19 46075978 to 46075991 13 + TSS region transcription start site region 156711
Tssr156712 19 46075999 to 46076020 21 + TSS region transcription start site region 156712
Tssr156713 19 46083065 to 46083076 11 + TSS region transcription start site region 156713
Tssr156714 19 46083109 to 46083122 13 + TSS region transcription start site region 156714
A039 19 46089001 to 46089192 191 DNA segment DNA segment, A039
D19Dcr35 19 46090901 to 46090996 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 35
Tssr156715 19 46108931 to 46108944 13 + TSS region transcription start site region 156715
A013 19 46124828 to 46125019 191 DNA segment DNA segment, A013
Tssr156716 19 46131888 to 46131904 16 + TSS region transcription start site region 156716
Elovl3 19 46131897 to 46135307 3410 + protein coding gene elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 3
Cpgi10985 19 46135393 to 46137551 2158 CpG island CpG island 10985
Pitx3 19 46135685 to 46148326 12641 - protein coding gene paired-like homeodomain transcription factor 3
Cpgi10986 19 46147388 to 46148966 1578 CpG island CpG island 10986
Tssr159609 19 46148249 to 46148255 6 - TSS region transcription start site region 159609
Tssr159610 19 46148369 to 46148386 17 - TSS region transcription start site region 159610
Cpgi10987 19 46152247 to 46152918 671 CpG island CpG island 10987
Tssr156717 19 46152505 to 46152514 9 + TSS region transcription start site region 156717
Gbf1 19 46152509 to 46286510 134001 + protein coding gene golgi-specific brefeldin A-resistance factor 1
Tssr156718 19 46152523 to 46152566 43 + TSS region transcription start site region 156718
D430033H22Rik 19 46180482 to 46185808 5326 unclassified gene RIKEN cDNA D430033H22 gene
Tssr159611 19 46186827 to 46186833 6 - TSS region transcription start site region 159611
Gm8974 19 46205380 to 46205858 478 - pseudogene predicted gene 8974
C130013I19Rik 19 46213098 to 46215984 2886 unclassified gene RIKEN cDNA C130013I19 gene
Tssr156719 19 46219733 to 46219734 1 + TSS region transcription start site region 156719
Tssr156720 19 46227826 to 46227830 4 + TSS region transcription start site region 156720
Gm16726 19 46264539 to 46267669 3130 - unclassified non-coding RNA gene predicted gene, 16726
Tssr159612 19 46267674 to 46267702 28 - TSS region transcription start site region 159612
Tssr159613 19 46267708 to 46267715 7 - TSS region transcription start site region 159613
Tssr5535 19 46267835 to 46267838 3 + TSS region transcription start site region 5535
Tssr156721 19 46267841 to 46267852 11 + TSS region transcription start site region 156721
4833438C02Rik 19 46303590 to 46305623 2033 - unclassified non-coding RNA gene RIKEN cDNA 4833438C02 gene
Cpgi10988 19 46304215 to 46306128 1913 CpG island CpG island 10988
Tssr156722 19 46304390 to 46304406 16 + TSS region transcription start site region 156722
Tssr159614 19 46304542 to 46304564 22 - TSS region transcription start site region 159614
Tssr159615 19 46304604 to 46304605 1 - TSS region transcription start site region 159615
Tssr159616 19 46304626 to 46304640 14 - TSS region transcription start site region 159616
Tssr156723 19 46304709 to 46304811 102 + TSS region transcription start site region 156723
Nfkb2 19 46304737 to 46312090 7353 + protein coding gene nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100
Tssr156724 19 46304830 to 46304839 9 + TSS region transcription start site region 156724
Tssr159617 19 46305291 to 46305303 12 - TSS region transcription start site region 159617
Tssr159618 19 46305564 to 46305575 11 - TSS region transcription start site region 159618
Tssr159619 19 46305579 to 46305627 48 - TSS region transcription start site region 159619
Tssr156725 19 46305682 to 46305741 59 + TSS region transcription start site region 156725
Tssr156726 19 46305745 to 46305787 42 + TSS region transcription start site region 156726
Tssr156727 19 46305856 to 46305870 14 + TSS region transcription start site region 156727
Tssr156728 19 46305884 to 46305907 23 + TSS region transcription start site region 156728
Tssr156729 19 46305909 to 46305927 18 + TSS region transcription start site region 156729
Tssr156730 19 46305943 to 46305961 18 + TSS region transcription start site region 156730
Tssr156731 19 46305972 to 46305981 9 + TSS region transcription start site region 156731
Tssr156732 19 46306023 to 46306032 9 + TSS region transcription start site region 156732
Tssr156733 19 46306093 to 46306109 16 + TSS region transcription start site region 156733
Tssr156734 19 46306117 to 46306154 37 + TSS region transcription start site region 156734
Tssr156735 19 46306160 to 46306171 11 + TSS region transcription start site region 156735
Tssr156736 19 46306243 to 46306255 12 + TSS region transcription start site region 156736
Tssr156737 19 46306258 to 46306263 5 + TSS region transcription start site region 156737
Tssr156738 19 46307351 to 46307373 22 + TSS region transcription start site region 156738
Tssr156739 19 46308224 to 46308231 7 + TSS region transcription start site region 156739
Cpgi10989 19 46308291 to 46308575 284 CpG island CpG island 10989
Cpgi10990 19 46308665 to 46309434 769 CpG island CpG island 10990
Tssr156740 19 46308835 to 46308846 11 + TSS region transcription start site region 156740
Cpgi10991 19 46309702 to 46310015 313 CpG island CpG island 10991
Tssr156741 19 46310205 to 46310230 25 + TSS region transcription start site region 156741
Tssr156742 19 46310302 to 46310317 15 + TSS region transcription start site region 156742
Psd 19 46312087 to 46327156 15069 - protein coding gene pleckstrin and Sec7 domain containing
Tssr159620 19 46312369 to 46312385 16 - TSS region transcription start site region 159620
Cpgi10992 19 46314633 to 46314803 170 CpG island CpG island 10992
Cpgi10993 19 46316949 to 46318587 1638 CpG island CpG island 10993
Tssr159621 19 46317957 to 46317960 3 - TSS region transcription start site region 159621
Tssr159622 19 46317962 to 46317965 3 - TSS region transcription start site region 159622
Tssr159623 19 46317982 to 46318062 80 - TSS region transcription start site region 159623
Tssr159624 19 46318066 to 46318077 11 - TSS region transcription start site region 159624
Tssr159625 19 46318123 to 46318147 24 - TSS region transcription start site region 159625
Tssr159626 19 46324697 to 46324728 31 - TSS region transcription start site region 159626
Tssr159627 19 46324829 to 46324845 16 - TSS region transcription start site region 159627
Cpgi10994 19 46326146 to 46327340 1194 CpG island CpG island 10994
Tssr159628 19 46326189 to 46326211 22 - TSS region transcription start site region 159628
Tssr159629 19 46326220 to 46326277 57 - TSS region transcription start site region 159629
Tssr159630 19 46326543 to 46326598 55 - TSS region transcription start site region 159630
Tssr159631 19 46327052 to 46327057 5 - TSS region transcription start site region 159631
Tssr159632 19 46327106 to 46327114 8 - TSS region transcription start site region 159632
Tssr159633 19 46327121 to 46327154 33 - TSS region transcription start site region 159633
Tssr159634 19 46327164 to 46327173 9 - TSS region transcription start site region 159634
Cpgi10995 19 46328093 to 46329671 1578 CpG island CpG island 10995
Tssr156743 19 46328179 to 46328205 26 + TSS region transcription start site region 156743
Fbxl15 19 46328184 to 46330446 2262 + protein coding gene F-box and leucine-rich repeat protein 15
Tssr156744 19 46328221 to 46328232 11 + TSS region transcription start site region 156744
Tssr159635 19 46328432 to 46328452 20 - TSS region transcription start site region 159635
Tssr156745 19 46328448 to 46328474 26 + TSS region transcription start site region 156745
Tssr156746 19 46328703 to 46328768 65 + TSS region transcription start site region 156746
Cuedc2 19 46329812 to 46338660 8848 - protein coding gene CUE domain containing 2
Cpgi10996 19 46329982 to 46330293 311 CpG island CpG island 10996
Tssr159636 19 46332695 to 46332708 13 - TSS region transcription start site region 159636
Tssr159637 19 46332776 to 46332791 15 - TSS region transcription start site region 159637
Tssr159638 19 46332799 to 46332810 11 - TSS region transcription start site region 159638
Tssr159639 19 46332870 to 46332903 33 - TSS region transcription start site region 159639
Tssr159640 19 46332914 to 46332928 14 - TSS region transcription start site region 159640
Gm26792 19 46335287 to 46338538 3251 + lincRNA gene predicted gene, 26792
Tssr159641 19 46338374 to 46338403 29 - TSS region transcription start site region 159641
Cpgi10997 19 46338406 to 46338726 320 CpG island CpG island 10997
Tssr159642 19 46338589 to 46338630 41 - TSS region transcription start site region 159642
Tssr159643 19 46338632 to 46338670 38 - TSS region transcription start site region 159643
Gm36493 19 46338776 to 46344131 5355 + lncRNA gene predicted gene, 36493
31.MMHAP38FLC4 19 46338820 to 46338995 175 DNA segment DNA segment, 31.MMHAP38FLC4
Tssr156747 19 46341118 to 46341122 4 + TSS region transcription start site region 156747
Mir146b 19 46342762 to 46342870 108 + miRNA gene microRNA 146b
2310034G01Rik 19 46348201 to 46348988 787 - lincRNA gene RIKEN cDNA 2310034G01 gene
Cpgi10998 19 46348591 to 46349916 1325 CpG island CpG island 10998
Tssr159644 19 46348968 to 46349001 33 - TSS region transcription start site region 159644
Tssr5536 19 46349043 to 46349103 60 + TSS region transcription start site region 5536
Tssr159645 19 46350246 to 46350279 33 - TSS region transcription start site region 159645