Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:46058369-46238386

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
In(19Fgf8-Pitx3)1Fsp 19 45736798 to 46148326 411528 chromosomal inversion inversion, Chr 19, Francois Spitz 1
Pprc1 19 46056525 to 46072909 16384 + protein coding gene peroxisome proliferative activated receptor, gamma, coactivator-related 1
Tssr156706 19 46064079 to 46064087 8 + TSS region transcription start site region 156706
Tssr156707 19 46064155 to 46064174 19 + TSS region transcription start site region 156707
Tssr156708 19 46064421 to 46064425 4 + TSS region transcription start site region 156708
Cpgi10984 19 46075540 to 46076506 966 CpG island CpG island 10984
Tssr156709 19 46075842 to 46075859 17 + TSS region transcription start site region 156709
Nolc1 19 46075863 to 46085530 9667 + protein coding gene nucleolar and coiled-body phosphoprotein 1
Tssr156710 19 46075939 to 46075946 7 + TSS region transcription start site region 156710
Tssr156711 19 46075978 to 46075991 13 + TSS region transcription start site region 156711
Tssr156712 19 46075999 to 46076020 21 + TSS region transcription start site region 156712
Tssr156713 19 46083065 to 46083076 11 + TSS region transcription start site region 156713
Tssr156714 19 46083109 to 46083122 13 + TSS region transcription start site region 156714
A039 19 46089001 to 46089192 191 DNA segment DNA segment, A039
D19Dcr35 19 46090901 to 46090996 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 35
Tssr156715 19 46108931 to 46108944 13 + TSS region transcription start site region 156715
A013 19 46124828 to 46125019 191 DNA segment DNA segment, A013
Tssr156716 19 46131888 to 46131904 16 + TSS region transcription start site region 156716
Elovl3 19 46131897 to 46135307 3410 + protein coding gene elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 3
Cpgi10985 19 46135393 to 46137551 2158 CpG island CpG island 10985
Pitx3 19 46135685 to 46148326 12641 - protein coding gene paired-like homeodomain transcription factor 3
Cpgi10986 19 46147388 to 46148966 1578 CpG island CpG island 10986
Tssr159609 19 46148249 to 46148255 6 - TSS region transcription start site region 159609
Tssr159610 19 46148369 to 46148386 17 - TSS region transcription start site region 159610
Cpgi10987 19 46152247 to 46152918 671 CpG island CpG island 10987
Tssr156717 19 46152505 to 46152514 9 + TSS region transcription start site region 156717
Gbf1 19 46152509 to 46286510 134001 + protein coding gene golgi-specific brefeldin A-resistance factor 1
Tssr156718 19 46152523 to 46152566 43 + TSS region transcription start site region 156718
D430033H22Rik 19 46180482 to 46185808 5326 unclassified gene RIKEN cDNA D430033H22 gene
Tssr159611 19 46186827 to 46186833 6 - TSS region transcription start site region 159611
Gm8974 19 46205380 to 46205858 478 - pseudogene predicted gene 8974
C130013I19Rik 19 46213098 to 46215984 2886 unclassified gene RIKEN cDNA C130013I19 gene
Tssr156719 19 46219733 to 46219734 1 + TSS region transcription start site region 156719
Tssr156720 19 46227826 to 46227830 4 + TSS region transcription start site region 156720