Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:45001074-45051343

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sema4g 19 44989101 to 45003397 14296 + protein coding gene sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
Tssr156647 19 45002041 to 45002062 21 + TSS region transcription start site region 156647
Mrpl43 19 45005014 to 45006442 1428 - protein coding gene mitochondrial ribosomal protein L43
Tssr156648 19 45005656 to 45005684 28 + TSS region transcription start site region 156648
Cpgi10923 19 45005682 to 45007358 1676 CpG island CpG island 10923
Tssr159542 19 45006111 to 45006122 11 - TSS region transcription start site region 159542
Tssr159543 19 45006385 to 45006450 65 - TSS region transcription start site region 159543
Tssr156649 19 45006475 to 45006524 49 + TSS region transcription start site region 156649
Twnk 19 45006558 to 45012762 6204 + protein coding gene twinkle mtDNA helicase
Tssr156650 19 45006622 to 45006668 46 + TSS region transcription start site region 156650
Tssr156651 19 45014995 to 45015006 11 + TSS region transcription start site region 156651
Tssr156652 19 45015168 to 45015187 19 + TSS region transcription start site region 156652
Cpgi10924 19 45015176 to 45015928 752 CpG island CpG island 10924
Lzts2 19 45015176 to 45027104 11928 + protein coding gene leucine zipper, putative tumor suppressor 2
Tssr156653 19 45015198 to 45015224 26 + TSS region transcription start site region 156653
Tssr156654 19 45015232 to 45015248 16 + TSS region transcription start site region 156654
D19Dcr34 19 45015459 to 45015554 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 34
Tssr156655 19 45016937 to 45016942 5 + TSS region transcription start site region 156655
Tssr156656 19 45017429 to 45017485 56 + TSS region transcription start site region 156656
Cpgi10925 19 45017480 to 45018626 1146 CpG island CpG island 10925
Tssr5531 19 45017632 to 45017674 42 + TSS region transcription start site region 5531
Tssr156657 19 45017689 to 45017702 13 + TSS region transcription start site region 156657
Tssr156658 19 45018051 to 45018063 12 + TSS region transcription start site region 156658
Tssr156659 19 45018114 to 45018153 39 + TSS region transcription start site region 156659
Tssr156660 19 45018154 to 45018197 43 + TSS region transcription start site region 156660
Cpgi10926 19 45024120 to 45024305 185 CpG island CpG island 10926
Cpgi10927 19 45024689 to 45025065 376 CpG island CpG island 10927
Cpgi10928 19 45026074 to 45026343 269 CpG island CpG island 10928
Pdzd7 19 45026906 to 45046614 19708 - protein coding gene PDZ domain containing 7
Cpgi10929 19 45028849 to 45029232 383 CpG island CpG island 10929
9430030N17Rik 19 45030403 to 45031131 728 unclassified gene RIKEN cDNA 9430030N17 gene
Cpgi10930 19 45036712 to 45037148 436 CpG island CpG island 10930
Cpgi10931 19 45039539 to 45040808 1269 CpG island CpG island 10931
Cpgi10932 19 45046315 to 45047973 1658 CpG island CpG island 10932
Tssr159544 19 45046618 to 45046645 27 - TSS region transcription start site region 159544
Tssr156661 19 45047557 to 45047572 15 + TSS region transcription start site region 156661
Sfxn3 19 45047576 to 45056383 8807 + protein coding gene sideroflexin 3
Tssr156662 19 45047598 to 45047670 72 + TSS region transcription start site region 156662
Tssr156663 19 45047781 to 45047838 57 + TSS region transcription start site region 156663
Tssr156664 19 45047845 to 45047873 28 + TSS region transcription start site region 156664