Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:44534758-44726816

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sec31b 19 44516957 to 44545848 28891 - protein coding gene Sec31 homolog B (S. cerevisiae)
Gm20538 19 44543722 to 44552831 9109 - protein coding gene predicted gene 20538
Cpgi10896 19 44545366 to 44546050 684 CpG island CpG island 10896
Tssr159530 19 44545809 to 44545832 23 - TSS region transcription start site region 159530
Tssr159531 19 44545836 to 44545871 35 - TSS region transcription start site region 159531
Ndufb8 19 44548983 to 44555442 6459 - protein coding gene NADH:ubiquinone oxidoreductase subunit B8
Cpgi10897 19 44554793 to 44555633 840 CpG island CpG island 10897
Tssr156618 19 44554955 to 44554957 2 + TSS region transcription start site region 156618
Tssr159532 19 44555398 to 44555437 39 - TSS region transcription start site region 159532
Cpgi10898 19 44562678 to 44563044 366 CpG island CpG island 10898
Tssr156619 19 44562841 to 44562879 38 + TSS region transcription start site region 156619
Hif1an 19 44562854 to 44576274 13420 + protein coding gene hypoxia-inducible factor 1, alpha subunit inhibitor
Tssr156620 19 44565064 to 44565068 4 + TSS region transcription start site region 156620
D19Dcr86 19 44584925 to 44585024 99 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 86
Cpgi10899 19 44591026 to 44591206 180 CpG island CpG island 10899
Gm35460 19 44614758 to 44646816 32058 + lncRNA gene predicted gene, 35460
Cpgi10900 19 44639902 to 44640325 423 CpG island CpG island 10900
Cpgi10901 19 44669696 to 44669893 197 CpG island CpG island 10901
Cpgi10902 19 44670338 to 44671615 1277 CpG island CpG island 10902
Cpgi10903 19 44671854 to 44672446 592 CpG island CpG island 10903
Gm41854 19 44672417 to 44674865 2448 + lncRNA gene predicted gene, 41854
Cpgi10904 19 44674582 to 44675314 732 CpG island CpG island 10904
Cpgi10905 19 44683709 to 44684660 951 CpG island CpG island 10905
Gm26644 19 44692367 to 44695275 2908 - lincRNA gene predicted gene, 26644
Cpgi10906 19 44692529 to 44692990 461 CpG island CpG island 10906
Tssr159533 19 44695303 to 44695318 15 - TSS region transcription start site region 159533
Tssr159534 19 44695460 to 44695481 21 - TSS region transcription start site region 159534
Tssr159535 19 44696373 to 44696403 30 - TSS region transcription start site region 159535
Tssr159536 19 44696882 to 44696890 8 - TSS region transcription start site region 159536
Tssr159537 19 44696942 to 44696949 7 - TSS region transcription start site region 159537
Cpgi10907 19 44719977 to 44720709 732 CpG island CpG island 10907
Cpgi10908 19 44726031 to 44726473 442 CpG island CpG island 10908