Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:44222893-46413429

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670 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scd3 19 44203288 to 44244016 40728 + protein coding gene stearoyl-coenzyme A desaturase 3
Tssr156554 19 44229629 to 44229632 3 + TSS region transcription start site region 156554
Tssr159438 19 44231664 to 44231697 33 - TSS region transcription start site region 159438
Tssr156555 19 44236993 to 44237020 27 + TSS region transcription start site region 156555
Tssr156556 19 44237716 to 44237741 25 + TSS region transcription start site region 156556
Cpgi10887 19 44238339 to 44238678 339 CpG island CpG island 10887
Tssr156557 19 44241893 to 44241908 15 + TSS region transcription start site region 156557
Tssr156558 19 44242053 to 44242070 17 + TSS region transcription start site region 156558
Tssr156559 19 44242254 to 44242262 8 + TSS region transcription start site region 156559
Tssr156560 19 44242309 to 44242337 28 + TSS region transcription start site region 156560
Tssr156561 19 44243678 to 44243709 31 + TSS region transcription start site region 156561
Tssr159439 19 44246560 to 44246587 27 - TSS region transcription start site region 159439
Cpgi10888 19 44247577 to 44248498 921 CpG island CpG island 10888
Tssr159440 19 44248126 to 44248173 47 - TSS region transcription start site region 159440
Gm6951 19 44252622 to 44261446 8824 + pseudogene predicted gene 6951
Cpgi10889 19 44266818 to 44267568 750 CpG island CpG island 10889
Gm35183 19 44272137 to 44278225 6088 + lncRNA gene predicted gene, 35183
Tssr159441 19 44280789 to 44280806 17 - TSS region transcription start site region 159441
Tssr156562 19 44280964 to 44280970 6 + TSS region transcription start site region 156562
Tssr156563 19 44281039 to 44281051 12 + TSS region transcription start site region 156563
Gm41853 19 44282343 to 44283697 1354 + lncRNA gene predicted gene, 41853
Cpgi10890 19 44284080 to 44284776 696 CpG island CpG island 10890
Scd2 19 44293676 to 44306864 13188 + protein coding gene stearoyl-Coenzyme A desaturase 2
Cpgi10891 19 44293970 to 44294399 429 CpG island CpG island 10891
Tssr5523 19 44294003 to 44294041 38 + TSS region transcription start site region 5523
Tssr156564 19 44294073 to 44294099 26 + TSS region transcription start site region 156564
Tssr156565 19 44294142 to 44294149 7 + TSS region transcription start site region 156565
Tssr156566 19 44294158 to 44294168 10 + TSS region transcription start site region 156566
Tssr156567 19 44294193 to 44294206 13 + TSS region transcription start site region 156567
Tssr156568 19 44294232 to 44294246 14 + TSS region transcription start site region 156568
Tssr156569 19 44294256 to 44294259 3 + TSS region transcription start site region 156569
Tssr156570 19 44294265 to 44294273 8 + TSS region transcription start site region 156570
Tssr156571 19 44294296 to 44294304 8 + TSS region transcription start site region 156571
Tssr159442 19 44294799 to 44294805 6 - TSS region transcription start site region 159442
Tssr156572 19 44294902 to 44294919 17 + TSS region transcription start site region 156572
Tssr156573 19 44294920 to 44294938 18 + TSS region transcription start site region 156573
Tssr159443 19 44294954 to 44294972 18 - TSS region transcription start site region 159443
Tssr156574 19 44294966 to 44294980 14 + TSS region transcription start site region 156574
Tssr156575 19 44294997 to 44295018 21 + TSS region transcription start site region 156575
Tssr156576 19 44295026 to 44295044 18 + TSS region transcription start site region 156576
Tssr156577 19 44295087 to 44295127 40 + TSS region transcription start site region 156577
Tssr156578 19 44296632 to 44296653 21 + TSS region transcription start site region 156578
Tssr156579 19 44296839 to 44296860 21 + TSS region transcription start site region 156579
Tssr156580 19 44298060 to 44298127 67 + TSS region transcription start site region 156580
Tssr156581 19 44301277 to 44301297 20 + TSS region transcription start site region 156581
Tssr156582 19 44301351 to 44301398 47 + TSS region transcription start site region 156582
Tssr156583 19 44302996 to 44303012 16 + TSS region transcription start site region 156583
Mir5114 19 44303171 to 44303231 60 + miRNA gene microRNA 5114
Tssr156584 19 44303201 to 44303218 17 + TSS region transcription start site region 156584
Tssr156585 19 44303239 to 44303255 16 + TSS region transcription start site region 156585
Tssr156586 19 44303301 to 44303310 9 + TSS region transcription start site region 156586
Tssr156587 19 44303336 to 44303346 10 + TSS region transcription start site region 156587
Tssr156588 19 44303347 to 44303412 65 + TSS region transcription start site region 156588
Tssr156589 19 44303444 to 44303455 11 + TSS region transcription start site region 156589
Tssr156590 19 44303468 to 44303477 9 + TSS region transcription start site region 156590
Tssr156591 19 44303538 to 44303560 22 + TSS region transcription start site region 156591
Tssr156592 19 44303813 to 44303833 20 + TSS region transcription start site region 156592
Tssr156593 19 44304597 to 44304617 20 + TSS region transcription start site region 156593
Tssr156594 19 44305919 to 44305946 27 + TSS region transcription start site region 156594
Cpgi10892 19 44314563 to 44314728 165 CpG island CpG island 10892
Tssr156595 19 44333318 to 44333333 15 + TSS region transcription start site region 156595
Scd4 19 44333326 to 44346743 13417 + protein coding gene stearoyl-coenzyme A desaturase 4
Tssr156596 19 44333341 to 44333358 17 + TSS region transcription start site region 156596
Tssr156597 19 44333367 to 44333380 13 + TSS region transcription start site region 156597
Tssr156598 19 44333402 to 44333411 9 + TSS region transcription start site region 156598
Tssr156599 19 44333422 to 44333427 5 + TSS region transcription start site region 156599
Tssr156600 19 44333854 to 44333866 12 + TSS region transcription start site region 156600
Tssr156601 19 44376781 to 44376797 16 + TSS region transcription start site region 156601
Tssr156602 19 44376873 to 44376879 6 + TSS region transcription start site region 156602
Tssr159444 19 44378194 to 44378206 12 - TSS region transcription start site region 159444
Tssr156603 19 44378369 to 44378372 3 + TSS region transcription start site region 156603
Tssr156604 19 44386157 to 44386165 8 + TSS region transcription start site region 156604
Cpgi10893 19 44388457 to 44388906 449 CpG island CpG island 10893
Tssr159445 19 44388516 to 44388575 59 - TSS region transcription start site region 159445
Tssr156605 19 44388834 to 44388845 11 + TSS region transcription start site region 156605
Scd1 19 44394451 to 44407709 13258 - protein coding gene stearoyl-Coenzyme A desaturase 1
Tssr159446 19 44394582 to 44394593 11 - TSS region transcription start site region 159446
Tssr159447 19 44394759 to 44394768 9 - TSS region transcription start site region 159447
Tssr159448 19 44394791 to 44394794 3 - TSS region transcription start site region 159448
Tssr159449 19 44394843 to 44394857 14 - TSS region transcription start site region 159449
Tssr159450 19 44394870 to 44394871 1 - TSS region transcription start site region 159450
Tssr159451 19 44394942 to 44394951 9 - TSS region transcription start site region 159451
Tssr159452 19 44395232 to 44395245 13 - TSS region transcription start site region 159452
Tssr159453 19 44395291 to 44395314 23 - TSS region transcription start site region 159453
Tssr159454 19 44395323 to 44395333 10 - TSS region transcription start site region 159454
Tssr159455 19 44395616 to 44395639 23 - TSS region transcription start site region 159455
Tssr159456 19 44395738 to 44395758 20 - TSS region transcription start site region 159456
Tssr159457 19 44395782 to 44395787 5 - TSS region transcription start site region 159457
Tssr159458 19 44395812 to 44395821 9 - TSS region transcription start site region 159458
Tssr159459 19 44395902 to 44395913 11 - TSS region transcription start site region 159459
Tssr159460 19 44395939 to 44395949 10 - TSS region transcription start site region 159460
Tssr159461 19 44395998 to 44396010 12 - TSS region transcription start site region 159461
Tssr159462 19 44396026 to 44396042 16 - TSS region transcription start site region 159462
Tssr159463 19 44396072 to 44396081 9 - TSS region transcription start site region 159463
Tssr159464 19 44396095 to 44396111 16 - TSS region transcription start site region 159464
Tssr159465 19 44396119 to 44396131 12 - TSS region transcription start site region 159465
Tssr159466 19 44396140 to 44396149 9 - TSS region transcription start site region 159466
Tssr159467 19 44396193 to 44396213 20 - TSS region transcription start site region 159467
Tssr5524 19 44396359 to 44396364 5 - TSS region transcription start site region 5524
Tssr156606 19 44396408 to 44396426 18 + TSS region transcription start site region 156606
Tssr159468 19 44396441 to 44396459 18 - TSS region transcription start site region 159468
Tssr159469 19 44396511 to 44396524 13 - TSS region transcription start site region 159469
Tssr159470 19 44396528 to 44396538 10 - TSS region transcription start site region 159470
Tssr159471 19 44396545 to 44396571 26 - TSS region transcription start site region 159471
Tssr159472 19 44396581 to 44396597 16 - TSS region transcription start site region 159472
Tssr159473 19 44396600 to 44396616 16 - TSS region transcription start site region 159473
Tssr159474 19 44396625 to 44396638 13 - TSS region transcription start site region 159474
Tssr159475 19 44396670 to 44396685 15 - TSS region transcription start site region 159475
Tssr159476 19 44396688 to 44396703 15 - TSS region transcription start site region 159476
Tssr159477 19 44396708 to 44396712 4 - TSS region transcription start site region 159477
Tssr159478 19 44396718 to 44396733 15 - TSS region transcription start site region 159478
Tssr156607 19 44396732 to 44396747 15 + TSS region transcription start site region 156607
Tssr159479 19 44396742 to 44396751 9 - TSS region transcription start site region 159479
Tssr159480 19 44396770 to 44396783 13 - TSS region transcription start site region 159480
Tssr159481 19 44396819 to 44396842 23 - TSS region transcription start site region 159481
Tssr159482 19 44396919 to 44396930 11 - TSS region transcription start site region 159482
D19Mit67.2 19 44397005 to 44397170 165 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 67.2
Tssr159483 19 44397010 to 44397028 18 - TSS region transcription start site region 159483
Tssr159484 19 44397044 to 44397055 11 - TSS region transcription start site region 159484
D19Nds1 19 44397113 to 44397283 170 DNA segment DNA segment, Chr 19, Nuffield Department of Surgery 1
Tssr156608 19 44397141 to 44397162 21 + TSS region transcription start site region 156608
Renmq1 19 44397155 to 44397266 111 QTL renal mercury accumulation QTL 1
D19Mit67 19 44397155 to 44397266 111 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 67
Tssr159485 19 44397170 to 44397173 3 - TSS region transcription start site region 159485
Tssr159486 19 44397177 to 44397187 10 - TSS region transcription start site region 159486
Tssr159487 19 44397258 to 44397269 11 - TSS region transcription start site region 159487
Tssr159488 19 44397275 to 44397312 37 - TSS region transcription start site region 159488
Tssr159489 19 44397329 to 44397372 43 - TSS region transcription start site region 159489
Tssr156609 19 44397351 to 44397358 7 + TSS region transcription start site region 156609
Tssr159490 19 44397431 to 44397438 7 - TSS region transcription start site region 159490
Tssr159491 19 44397466 to 44397487 21 - TSS region transcription start site region 159491
Tssr159492 19 44397517 to 44397530 13 - TSS region transcription start site region 159492
Tssr159493 19 44397543 to 44397554 11 - TSS region transcription start site region 159493
Tssr159494 19 44397563 to 44397592 29 - TSS region transcription start site region 159494
Tssr159495 19 44397681 to 44397741 60 - TSS region transcription start site region 159495
Tssr159496 19 44397751 to 44397761 10 - TSS region transcription start site region 159496
Tssr159497 19 44397764 to 44397771 7 - TSS region transcription start site region 159497
Tssr159498 19 44397776 to 44397782 6 - TSS region transcription start site region 159498
Tssr159499 19 44397806 to 44397834 28 - TSS region transcription start site region 159499
Tssr159500 19 44397837 to 44397848 11 - TSS region transcription start site region 159500
Tssr159501 19 44397852 to 44397884 32 - TSS region transcription start site region 159501
Tssr159502 19 44397888 to 44397895 7 - TSS region transcription start site region 159502
Tssr159503 19 44397901 to 44397947 46 - TSS region transcription start site region 159503
Tssr159504 19 44397980 to 44398012 32 - TSS region transcription start site region 159504
Tssr159505 19 44398093 to 44398118 25 - TSS region transcription start site region 159505
Tssr159506 19 44400165 to 44400182 17 - TSS region transcription start site region 159506
Tssr159507 19 44400186 to 44400235 49 - TSS region transcription start site region 159507
Tssr159508 19 44400272 to 44400308 36 - TSS region transcription start site region 159508
Tssr156610 19 44401867 to 44401882 15 + TSS region transcription start site region 156610
Tssr159509 19 44403228 to 44403238 10 - TSS region transcription start site region 159509
Tssr159510 19 44403241 to 44403259 18 - TSS region transcription start site region 159510
Tssr156611 19 44403254 to 44403260 6 + TSS region transcription start site region 156611
Tssr159511 19 44403277 to 44403299 22 - TSS region transcription start site region 159511
Tssr159512 19 44403582 to 44403595 13 - TSS region transcription start site region 159512
Tssr159513 19 44406530 to 44406582 52 - TSS region transcription start site region 159513
Tssr156612 19 44406602 to 44406632 30 + TSS region transcription start site region 156612
Tssr159514 19 44406625 to 44406630 5 - TSS region transcription start site region 159514
Tssr159515 19 44406631 to 44406652 21 - TSS region transcription start site region 159515
Tssr156613 19 44406683 to 44406731 48 + TSS region transcription start site region 156613
Tssr159516 19 44406718 to 44406768 50 - TSS region transcription start site region 159516
Cpgi10894 19 44407277 to 44407651 374 CpG island CpG island 10894
Tssr5525 19 44407418 to 44407475 57 - TSS region transcription start site region 5525
Tssr159517 19 44407489 to 44407498 9 - TSS region transcription start site region 159517
Tssr5526 19 44407505 to 44407508 3 - TSS region transcription start site region 5526
Tssr5527 19 44407515 to 44407518 3 - TSS region transcription start site region 5527
Tssr5528 19 44407544 to 44407548 4 - TSS region transcription start site region 5528
Tssr159518 19 44407553 to 44407569 16 - TSS region transcription start site region 159518
Tssr5529 19 44407582 to 44407599 17 - TSS region transcription start site region 5529
Tssr159519 19 44407610 to 44407623 13 - TSS region transcription start site region 159519
Tssr159520 19 44407659 to 44407668 9 - TSS region transcription start site region 159520
D19Mit1000 19 44407680 to 44407829 149 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 1000
Tssr159521 19 44407703 to 44407712 9 - TSS region transcription start site region 159521
Tssr159522 19 44407809 to 44407822 13 - TSS region transcription start site region 159522
Tssr159523 19 44407831 to 44407877 46 - TSS region transcription start site region 159523
Tssr159524 19 44407883 to 44407901 18 - TSS region transcription start site region 159524
Tssr156614 19 44408020 to 44408038 18 + TSS region transcription start site region 156614
Tssr159525 19 44408734 to 44408757 23 - TSS region transcription start site region 159525
Tssr159526 19 44408764 to 44408776 12 - TSS region transcription start site region 159526
Tssr159527 19 44410457 to 44410466 9 - TSS region transcription start site region 159527
Tssr159528 19 44410475 to 44410491 16 - TSS region transcription start site region 159528
Tssr159529 19 44446252 to 44446259 7 - TSS region transcription start site region 159529
Gm35406 19 44453633 to 44458483 4850 + lncRNA gene predicted gene, 35406
Tssr156615 19 44493467 to 44493500 33 + TSS region transcription start site region 156615
Wnt8b 19 44493472 to 44514273 20801 + protein coding gene wingless-type MMTV integration site family, member 8B
Cpgi10895 19 44511185 to 44512493 1308 CpG island CpG island 10895
Tssr156616 19 44511197 to 44511208 11 + TSS region transcription start site region 156616
Tssr156617 19 44511232 to 44511242 10 + TSS region transcription start site region 156617
Sec31b 19 44516957 to 44545848 28891 - protein coding gene Sec31 homolog B (S. cerevisiae)
Gm20538 19 44543722 to 44552831 9109 - protein coding gene predicted gene 20538
Cpgi10896 19 44545366 to 44546050 684 CpG island CpG island 10896
Tssr159530 19 44545809 to 44545832 23 - TSS region transcription start site region 159530
Tssr159531 19 44545836 to 44545871 35 - TSS region transcription start site region 159531
Ndufb8 19 44548983 to 44555442 6459 - protein coding gene NADH:ubiquinone oxidoreductase subunit B8
Cpgi10897 19 44554793 to 44555633 840 CpG island CpG island 10897
Tssr156618 19 44554955 to 44554957 2 + TSS region transcription start site region 156618
Tssr159532 19 44555398 to 44555437 39 - TSS region transcription start site region 159532
Cpgi10898 19 44562678 to 44563044 366 CpG island CpG island 10898
Tssr156619 19 44562841 to 44562879 38 + TSS region transcription start site region 156619
Hif1an 19 44562854 to 44576274 13420 + protein coding gene hypoxia-inducible factor 1, alpha subunit inhibitor
Tssr156620 19 44565064 to 44565068 4 + TSS region transcription start site region 156620