Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:4398532-4598543

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kdm2a 19 4316144 to 4398596 82452 - protein coding gene lysine (K)-specific demethylase 2A
Cpgi10399 19 4396445 to 4398710 2265 CpG island CpG island 10399
9430078G10Rik 19 4397713 to 4399820 2107 unclassified gene RIKEN cDNA 9430078G10 gene
Rhod 19 4425457 to 4439424 13967 - protein coding gene ras homolog family member D
Cpgi10400 19 4438907 to 4439883 976 CpG island CpG island 10400
A930001C03Rik 19 4439323 to 4448325 9002 + lncRNA gene RIKEN cDNA A930001C03 gene
Tssr157491 19 4439369 to 4439386 17 - TSS region transcription start site region 157491
Tssr157492 19 4439388 to 4439450 62 - TSS region transcription start site region 157492
Tssr154318 19 4439511 to 4439539 28 + TSS region transcription start site region 154318
Tssr157493 19 4440398 to 4440409 11 - TSS region transcription start site region 157493
Tssr157494 19 4440447 to 4440458 11 - TSS region transcription start site region 157494
Syt12 19 4445908 to 4477143 31235 - protein coding gene synaptotagmin XII
Cpgi10401 19 4476248 to 4477511 1263 CpG island CpG island 10401
Tssr157495 19 4477119 to 4477161 42 - TSS region transcription start site region 157495
Tssr157496 19 4477567 to 4477592 25 - TSS region transcription start site region 157496
2010003K11Rik 19 4496790 to 4498583 1793 - protein coding gene RIKEN cDNA 2010003K11 gene
Tssr157497 19 4498399 to 4498410 11 - TSS region transcription start site region 157497
Tssr157498 19 4498532 to 4498543 11 - TSS region transcription start site region 157498
Tssr157499 19 4498547 to 4498572 25 - TSS region transcription start site region 157499
Tssr157500 19 4498574 to 4498596 22 - TSS region transcription start site region 157500
Tssr157501 19 4498603 to 4498614 11 - TSS region transcription start site region 157501
Cpgi10402 19 4509839 to 4511261 1422 CpG island CpG island 10402
Pcx 19 4510472 to 4621752 111280 + protein coding gene pyruvate carboxylase
Tssr154319 19 4510480 to 4510487 7 + TSS region transcription start site region 154319
Tssr154320 19 4510498 to 4510508 10 + TSS region transcription start site region 154320
Tssr154321 19 4510510 to 4510532 22 + TSS region transcription start site region 154321
Tssr154322 19 4510536 to 4510552 16 + TSS region transcription start site region 154322
Tssr154323 19 4517781 to 4517811 30 + TSS region transcription start site region 154323
Tssr154324 19 4558007 to 4558011 4 + TSS region transcription start site region 154324
Tssr154325 19 4558808 to 4558816 8 + TSS region transcription start site region 154325
Tssr154326 19 4594312 to 4594332 20 + TSS region transcription start site region 154326
Tssr154327 19 4594337 to 4594361 24 + TSS region transcription start site region 154327
Tssr154328 19 4594363 to 4594394 31 + TSS region transcription start site region 154328
Tssr154329 19 4594398 to 4594422 24 + TSS region transcription start site region 154329