Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:43956876-44257632

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpn1 19 43956307 to 43986551 30244 - protein coding gene carboxypeptidase N, polypeptide 1
Tssr159403 19 43968491 to 43968509 18 - TSS region transcription start site region 159403
Tssr159404 19 43968543 to 43968563 20 - TSS region transcription start site region 159404
Tssr159405 19 43968669 to 43968698 29 - TSS region transcription start site region 159405
Cpgi10881 19 43980762 to 43981022 260 CpG island CpG island 10881
Tssr159406 19 43980852 to 43980863 11 - TSS region transcription start site region 159406
Cpgi10882 19 43986006 to 43986326 320 CpG island CpG island 10882
Tssr159407 19 43986106 to 43986120 14 - TSS region transcription start site region 159407
Tssr159408 19 43986124 to 43986133 9 - TSS region transcription start site region 159408
Tssr159409 19 43986135 to 43986223 88 - TSS region transcription start site region 159409
Tssr159410 19 43986348 to 43986359 11 - TSS region transcription start site region 159410
Tssr159411 19 43986366 to 43986377 11 - TSS region transcription start site region 159411
Tssr159412 19 43986401 to 43986412 11 - TSS region transcription start site region 159412
Tssr159413 19 43986479 to 43986491 12 - TSS region transcription start site region 159413
Tssr159414 19 43986495 to 43986527 32 - TSS region transcription start site region 159414
Tssr159415 19 43986533 to 43986544 11 - TSS region transcription start site region 159415
Tssr159416 19 43986552 to 43986561 9 - TSS region transcription start site region 159416
Cyp2c23 19 44005022 to 44029208 24186 - protein coding gene cytochrome P450, family 2, subfamily c, polypeptide 23
Tssr159417 19 44005228 to 44005229 1 - TSS region transcription start site region 159417
Tssr159418 19 44005476 to 44005499 23 - TSS region transcription start site region 159418
Tssr159419 19 44005565 to 44005613 48 - TSS region transcription start site region 159419
Tssr159420 19 44012427 to 44012442 15 - TSS region transcription start site region 159420
Tssr159421 19 44013656 to 44013667 11 - TSS region transcription start site region 159421
Tssr159422 19 44013845 to 44013854 9 - TSS region transcription start site region 159422
Tssr159423 19 44021619 to 44021636 17 - TSS region transcription start site region 159423
Tssr159424 19 44021654 to 44021697 43 - TSS region transcription start site region 159424
Tssr159425 19 44021731 to 44021762 31 - TSS region transcription start site region 159425
Tssr159426 19 44021763 to 44021775 12 - TSS region transcription start site region 159426
D19Mit112 19 44022415 to 44022525 110 DNA segment DNA Segment, Chr 19, Massachusetts Institute of Technology 112
Tssr159427 19 44029088 to 44029098 10 - TSS region transcription start site region 159427
Tssr159428 19 44029201 to 44029214 13 - TSS region transcription start site region 159428
Erlin1 19 44034944 to 44069785 34841 - protein coding gene ER lipid raft associated 1
Gm18230 19 44052234 to 44052736 502 - pseudogene predicted gene, 18230
Tssr5522 19 44057209 to 44057220 11 - TSS region transcription start site region 5522
Cpgi10883 19 44069027 to 44070174 1147 CpG island CpG island 10883
Tssr159429 19 44069360 to 44069422 62 - TSS region transcription start site region 159429
Tssr159430 19 44069646 to 44069675 29 - TSS region transcription start site region 159430
Tssr159431 19 44069690 to 44069708 18 - TSS region transcription start site region 159431
Tssr159432 19 44069736 to 44069787 51 - TSS region transcription start site region 159432
Chuk 19 44073335 to 44107480 34145 - protein coding gene conserved helix-loop-helix ubiquitous kinase
Cpgi10884 19 44106876 to 44107632 756 CpG island CpG island 10884
Tssr159433 19 44107426 to 44107441 15 - TSS region transcription start site region 159433
Tssr159434 19 44107447 to 44107492 45 - TSS region transcription start site region 159434
Tssr156551 19 44107521 to 44107588 67 + TSS region transcription start site region 156551
Cwf19l1 19 44108644 to 44135876 27232 - protein coding gene CWF19-like 1, cell cycle control (S. pombe)
Gm24336 19 44113979 to 44114124 145 - snoRNA gene predicted gene, 24336
Cpgi10885 19 44135223 to 44135950 727 CpG island CpG island 10885
Tssr159435 19 44135816 to 44135881 65 - TSS region transcription start site region 159435
Bloc1s2 19 44139266 to 44146446 7180 - protein coding gene biogenesis of lysosomal organelles complex-1, subunit 2
Cpgi10886 19 44146050 to 44146655 605 CpG island CpG island 10886
Tssr159436 19 44146433 to 44146447 14 - TSS region transcription start site region 159436
Pkd2l1 19 44147637 to 44192442 44805 - protein coding gene polycystic kidney disease 2-like 1
Tssr156552 19 44203213 to 44203229 16 + TSS region transcription start site region 156552
D19Dcr85 19 44203215 to 44203311 96 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 85
Tssr156553 19 44203265 to 44203284 19 + TSS region transcription start site region 156553
Scd3 19 44203288 to 44244016 40728 + protein coding gene stearoyl-coenzyme A desaturase 3
Tssr159437 19 44215550 to 44215566 16 - TSS region transcription start site region 159437
Tssr156554 19 44229629 to 44229632 3 + TSS region transcription start site region 156554
Tssr159438 19 44231664 to 44231697 33 - TSS region transcription start site region 159438
Tssr156555 19 44236993 to 44237020 27 + TSS region transcription start site region 156555
Tssr156556 19 44237716 to 44237741 25 + TSS region transcription start site region 156556
Cpgi10887 19 44238339 to 44238678 339 CpG island CpG island 10887
Tssr156557 19 44241893 to 44241908 15 + TSS region transcription start site region 156557
Tssr156558 19 44242053 to 44242070 17 + TSS region transcription start site region 156558
Tssr156559 19 44242254 to 44242262 8 + TSS region transcription start site region 156559
Tssr156560 19 44242309 to 44242337 28 + TSS region transcription start site region 156560
Tssr156561 19 44243678 to 44243709 31 + TSS region transcription start site region 156561
Tssr159439 19 44246560 to 44246587 27 - TSS region transcription start site region 159439
Cpgi10888 19 44247577 to 44248498 921 CpG island CpG island 10888
Tssr159440 19 44248126 to 44248173 47 - TSS region transcription start site region 159440
Gm6951 19 44252622 to 44261446 8824 + pseudogene predicted gene 6951