Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:43572637-44767442

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381 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi10865 19 43583604 to 43583812 208 CpG island CpG island 10865
Cpgi10866 19 43599688 to 43600108 420 CpG island CpG island 10866
Cpgi10867 19 43601000 to 43601869 869 CpG island CpG island 10867
Cpgi10868 19 43606687 to 43607255 568 CpG island CpG island 10868
Gm20467 19 43609077 to 43610625 1548 - lincRNA gene predicted gene 20467
Cpgi10869 19 43610246 to 43610904 658 CpG island CpG island 10869
Gm46656 19 43610832 to 43611890 1058 - lncRNA gene predicted gene, 46656
Cpgi10870 19 43612018 to 43612945 927 CpG island CpG island 10870
Tssr156516 19 43612299 to 43612321 22 + TSS region transcription start site region 156516
Nkx2-3 19 43612325 to 43615892 3567 + protein coding gene NK2 homeobox 3
Tssr156517 19 43612392 to 43612416 24 + TSS region transcription start site region 156517
Cpgi10871 19 43613954 to 43615399 1445 CpG island CpG island 10871
Cpgi10872 19 43615918 to 43616920 1002 CpG island CpG island 10872
Cpgi10873 19 43617045 to 43617197 152 CpG island CpG island 10873
Cpgi10874 19 43619977 to 43620370 393 CpG island CpG island 10874
Gm22646 19 43622446 to 43622560 114 + miRNA gene predicted gene, 22646
Gm4311 19 43637372 to 43642404 5032 - unclassified gene predicted gene 4311
Gm34922 19 43645554 to 43655630 10076 + lncRNA gene predicted gene, 34922
Tssr156518 19 43647480 to 43647485 5 + TSS region transcription start site region 156518
Slc25a28 19 43663822 to 43674881 11059 - protein coding gene solute carrier family 25, member 28
Cpgi10875 19 43674109 to 43676161 2052 CpG island CpG island 10875
Tssr159386 19 43674844 to 43674909 65 - TSS region transcription start site region 159386
Tssr156519 19 43675173 to 43675192 19 + TSS region transcription start site region 156519
BC037704 19 43675178 to 43677170 1992 + lncRNA gene cDNA sequence BC037704
Tssr156520 19 43675460 to 43675482 22 + TSS region transcription start site region 156520
Cpgi10876 19 43689388 to 43690276 888 CpG island CpG island 10876
Tssr156521 19 43689647 to 43689658 11 + TSS region transcription start site region 156521
Tssr156522 19 43689672 to 43689695 23 + TSS region transcription start site region 156522
Entpd7 19 43689672 to 43733697 44025 + protein coding gene ectonucleoside triphosphate diphosphohydrolase 7
Tssr156523 19 43689798 to 43689868 70 + TSS region transcription start site region 156523
Tssr156524 19 43711417 to 43711460 43 + TSS region transcription start site region 156524
Tssr159387 19 43717635 to 43717641 6 - TSS region transcription start site region 159387
Cpgi10877 19 43729715 to 43730028 313 CpG island CpG island 10877
Tssr156525 19 43731171 to 43731175 4 + TSS region transcription start site region 156525
Tssr156526 19 43731441 to 43731461 20 + TSS region transcription start site region 156526
Tssr156527 19 43731778 to 43731799 21 + TSS region transcription start site region 156527
Tssr156528 19 43731997 to 43732001 4 + TSS region transcription start site region 156528
Tssr156529 19 43732260 to 43732264 4 + TSS region transcription start site region 156529
Cox15 19 43733254 to 43753000 19746 - protein coding gene cytochrome c oxidase assembly protein 15
Tssr159388 19 43735941 to 43735944 3 - TSS region transcription start site region 159388
Tssr159389 19 43740535 to 43740539 4 - TSS region transcription start site region 159389
Tssr159390 19 43751662 to 43751681 19 - TSS region transcription start site region 159390
Tssr159391 19 43751706 to 43751708 2 - TSS region transcription start site region 159391
Cpgi10878 19 43752655 to 43753570 915 CpG island CpG island 10878
Tssr159392 19 43752891 to 43752902 11 - TSS region transcription start site region 159392
Tssr159393 19 43752924 to 43753001 77 - TSS region transcription start site region 159393
Tssr156530 19 43752992 to 43753064 72 + TSS region transcription start site region 156530
Cutc 19 43753023 to 43768638 15615 + protein coding gene cutC copper transporter
Tssr156531 19 43753074 to 43753110 36 + TSS region transcription start site region 156531
Tssr156532 19 43753112 to 43753131 19 + TSS region transcription start site region 156532
Tssr156533 19 43782181 to 43782193 12 + TSS region transcription start site region 156533
Tssr156534 19 43782297 to 43782313 16 + TSS region transcription start site region 156534
Abcc2 19 43782308 to 43838332 56024 + protein coding gene ATP-binding cassette, sub-family C (CFTR/MRP), member 2
Tssr156535 19 43782320 to 43782334 14 + TSS region transcription start site region 156535
Tssr156536 19 43782339 to 43782350 11 + TSS region transcription start site region 156536
Tssr156537 19 43782617 to 43782625 8 + TSS region transcription start site region 156537
Tssr156538 19 43783041 to 43783051 10 + TSS region transcription start site region 156538
Tssr156539 19 43786950 to 43786964 14 + TSS region transcription start site region 156539
Tssr156540 19 43786971 to 43786981 10 + TSS region transcription start site region 156540
Tssr156541 19 43787138 to 43787177 39 + TSS region transcription start site region 156541
Tssr156542 19 43788105 to 43788116 11 + TSS region transcription start site region 156542
Tssr156543 19 43788397 to 43788427 30 + TSS region transcription start site region 156543
Tssr156544 19 43792383 to 43792398 15 + TSS region transcription start site region 156544
Tssr156545 19 43794451 to 43794455 4 + TSS region transcription start site region 156545
Tssr156546 19 43808764 to 43808779 15 + TSS region transcription start site region 156546
Gm10768 19 43838803 to 43840845 2042 + lncRNA gene predicted gene 10768
Tssr156547 19 43839264 to 43839275 11 + TSS region transcription start site region 156547
Tssr156548 19 43840030 to 43840039 9 + TSS region transcription start site region 156548
Dnmbp 19 43846821 to 43940191 93370 - protein coding gene dynamin binding protein
Gm24400 19 43857245 to 43857351 106 - snRNA gene predicted gene, 24400
Cpgi10879 19 43879424 to 43879943 519 CpG island CpG island 10879
Tssr159394 19 43879711 to 43879729 18 - TSS region transcription start site region 159394
Tssr159395 19 43879772 to 43879802 30 - TSS region transcription start site region 159395
Tssr159396 19 43890555 to 43890566 11 - TSS region transcription start site region 159396
Tssr159397 19 43890575 to 43890586 11 - TSS region transcription start site region 159397
Tssr159398 19 43890592 to 43890610 18 - TSS region transcription start site region 159398
Tssr156549 19 43921066 to 43921077 11 + TSS region transcription start site region 156549
Tssr159399 19 43921410 to 43921419 9 - TSS region transcription start site region 159399
n-R5s21 19 43932316 to 43932432 116 + rRNA gene nuclear encoded rRNA 5S 21
Cpgi10880 19 43939547 to 43940788 1241 CpG island CpG island 10880
Tssr156550 19 43939756 to 43939759 3 + TSS region transcription start site region 156550
1700084K02Rik 19 43939793 to 43940919 1126 unclassified gene RIKEN cDNA 1700084K02 gene
Tssr159400 19 43940146 to 43940165 19 - TSS region transcription start site region 159400
Tssr159401 19 43940168 to 43940199 31 - TSS region transcription start site region 159401
Tssr159402 19 43940203 to 43940232 29 - TSS region transcription start site region 159402
D19Dcr33 19 43947972 to 43948070 98 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 33
Cpn1 19 43956307 to 43986551 30244 - protein coding gene carboxypeptidase N, polypeptide 1
Tssr159403 19 43968491 to 43968509 18 - TSS region transcription start site region 159403
Tssr159404 19 43968543 to 43968563 20 - TSS region transcription start site region 159404
Tssr159405 19 43968669 to 43968698 29 - TSS region transcription start site region 159405
Cpgi10881 19 43980762 to 43981022 260 CpG island CpG island 10881
Tssr159406 19 43980852 to 43980863 11 - TSS region transcription start site region 159406
Cpgi10882 19 43986006 to 43986326 320 CpG island CpG island 10882
Tssr159407 19 43986106 to 43986120 14 - TSS region transcription start site region 159407
Tssr159408 19 43986124 to 43986133 9 - TSS region transcription start site region 159408
Tssr159409 19 43986135 to 43986223 88 - TSS region transcription start site region 159409
Tssr159410 19 43986348 to 43986359 11 - TSS region transcription start site region 159410
Tssr159411 19 43986366 to 43986377 11 - TSS region transcription start site region 159411
Tssr159412 19 43986401 to 43986412 11 - TSS region transcription start site region 159412
Tssr159413 19 43986479 to 43986491 12 - TSS region transcription start site region 159413
Tssr159414 19 43986495 to 43986527 32 - TSS region transcription start site region 159414
Tssr159415 19 43986533 to 43986544 11 - TSS region transcription start site region 159415
Tssr159416 19 43986552 to 43986561 9 - TSS region transcription start site region 159416
Cyp2c23 19 44005022 to 44029208 24186 - protein coding gene cytochrome P450, family 2, subfamily c, polypeptide 23
Tssr159417 19 44005228 to 44005229 1 - TSS region transcription start site region 159417
Tssr159418 19 44005476 to 44005499 23 - TSS region transcription start site region 159418
Tssr159419 19 44005565 to 44005613 48 - TSS region transcription start site region 159419
Tssr159420 19 44012427 to 44012442 15 - TSS region transcription start site region 159420
Tssr159421 19 44013656 to 44013667 11 - TSS region transcription start site region 159421
Tssr159422 19 44013845 to 44013854 9 - TSS region transcription start site region 159422
Tssr159423 19 44021619 to 44021636 17 - TSS region transcription start site region 159423
Tssr159424 19 44021654 to 44021697 43 - TSS region transcription start site region 159424
Tssr159425 19 44021731 to 44021762 31 - TSS region transcription start site region 159425
Tssr159426 19 44021763 to 44021775 12 - TSS region transcription start site region 159426
D19Mit112 19 44022415 to 44022525 110 DNA segment DNA Segment, Chr 19, Massachusetts Institute of Technology 112
Tssr159427 19 44029088 to 44029098 10 - TSS region transcription start site region 159427
Tssr159428 19 44029201 to 44029214 13 - TSS region transcription start site region 159428
Erlin1 19 44034944 to 44069785 34841 - protein coding gene ER lipid raft associated 1
Gm18230 19 44052234 to 44052736 502 - pseudogene predicted gene, 18230
Tssr5522 19 44057209 to 44057220 11 - TSS region transcription start site region 5522
Cpgi10883 19 44069027 to 44070174 1147 CpG island CpG island 10883
Tssr159429 19 44069360 to 44069422 62 - TSS region transcription start site region 159429
Tssr159430 19 44069646 to 44069675 29 - TSS region transcription start site region 159430
Tssr159431 19 44069690 to 44069708 18 - TSS region transcription start site region 159431
Tssr159432 19 44069736 to 44069787 51 - TSS region transcription start site region 159432
Chuk 19 44073335 to 44107480 34145 - protein coding gene conserved helix-loop-helix ubiquitous kinase
Cpgi10884 19 44106876 to 44107632 756 CpG island CpG island 10884
Tssr159433 19 44107426 to 44107441 15 - TSS region transcription start site region 159433
Tssr159434 19 44107447 to 44107492 45 - TSS region transcription start site region 159434
Tssr156551 19 44107521 to 44107588 67 + TSS region transcription start site region 156551
Cwf19l1 19 44108644 to 44135876 27232 - protein coding gene CWF19-like 1, cell cycle control (S. pombe)
Gm24336 19 44113979 to 44114124 145 - snoRNA gene predicted gene, 24336
Cpgi10885 19 44135223 to 44135950 727 CpG island CpG island 10885
Tssr159435 19 44135816 to 44135881 65 - TSS region transcription start site region 159435
Bloc1s2 19 44139266 to 44146446 7180 - protein coding gene biogenesis of lysosomal organelles complex-1, subunit 2
Cpgi10886 19 44146050 to 44146655 605 CpG island CpG island 10886
Tssr159436 19 44146433 to 44146447 14 - TSS region transcription start site region 159436
Pkd2l1 19 44147637 to 44192442 44805 - protein coding gene polycystic kidney disease 2-like 1
Tssr156552 19 44203213 to 44203229 16 + TSS region transcription start site region 156552
D19Dcr85 19 44203215 to 44203311 96 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 85
Tssr156553 19 44203265 to 44203284 19 + TSS region transcription start site region 156553
Scd3 19 44203288 to 44244016 40728 + protein coding gene stearoyl-coenzyme A desaturase 3
Tssr159437 19 44215550 to 44215566 16 - TSS region transcription start site region 159437
Tssr156554 19 44229629 to 44229632 3 + TSS region transcription start site region 156554
Tssr159438 19 44231664 to 44231697 33 - TSS region transcription start site region 159438
Tssr156555 19 44236993 to 44237020 27 + TSS region transcription start site region 156555
Tssr156556 19 44237716 to 44237741 25 + TSS region transcription start site region 156556
Cpgi10887 19 44238339 to 44238678 339 CpG island CpG island 10887
Tssr156557 19 44241893 to 44241908 15 + TSS region transcription start site region 156557
Tssr156558 19 44242053 to 44242070 17 + TSS region transcription start site region 156558
Tssr156559 19 44242254 to 44242262 8 + TSS region transcription start site region 156559
Tssr156560 19 44242309 to 44242337 28 + TSS region transcription start site region 156560
Tssr156561 19 44243678 to 44243709 31 + TSS region transcription start site region 156561
Tssr159439 19 44246560 to 44246587 27 - TSS region transcription start site region 159439
Cpgi10888 19 44247577 to 44248498 921 CpG island CpG island 10888
Tssr159440 19 44248126 to 44248173 47 - TSS region transcription start site region 159440
Gm6951 19 44252622 to 44261446 8824 + pseudogene predicted gene 6951
Cpgi10889 19 44266818 to 44267568 750 CpG island CpG island 10889
Gm35183 19 44272137 to 44278225 6088 + lncRNA gene predicted gene, 35183
Tssr159441 19 44280789 to 44280806 17 - TSS region transcription start site region 159441
Tssr156562 19 44280964 to 44280970 6 + TSS region transcription start site region 156562
Tssr156563 19 44281039 to 44281051 12 + TSS region transcription start site region 156563
Gm41853 19 44282343 to 44283697 1354 + lncRNA gene predicted gene, 41853
Cpgi10890 19 44284080 to 44284776 696 CpG island CpG island 10890
Scd2 19 44293676 to 44306864 13188 + protein coding gene stearoyl-Coenzyme A desaturase 2
Cpgi10891 19 44293970 to 44294399 429 CpG island CpG island 10891
Tssr5523 19 44294003 to 44294041 38 + TSS region transcription start site region 5523
Tssr156564 19 44294073 to 44294099 26 + TSS region transcription start site region 156564
Tssr156565 19 44294142 to 44294149 7 + TSS region transcription start site region 156565
Tssr156566 19 44294158 to 44294168 10 + TSS region transcription start site region 156566
Tssr156567 19 44294193 to 44294206 13 + TSS region transcription start site region 156567
Tssr156568 19 44294232 to 44294246 14 + TSS region transcription start site region 156568
Tssr156569 19 44294256 to 44294259 3 + TSS region transcription start site region 156569
Tssr156570 19 44294265 to 44294273 8 + TSS region transcription start site region 156570
Tssr156571 19 44294296 to 44294304 8 + TSS region transcription start site region 156571
Tssr159442 19 44294799 to 44294805 6 - TSS region transcription start site region 159442
Tssr156572 19 44294902 to 44294919 17 + TSS region transcription start site region 156572
Tssr156573 19 44294920 to 44294938 18 + TSS region transcription start site region 156573
Tssr159443 19 44294954 to 44294972 18 - TSS region transcription start site region 159443
Tssr156574 19 44294966 to 44294980 14 + TSS region transcription start site region 156574
Tssr156575 19 44294997 to 44295018 21 + TSS region transcription start site region 156575
Tssr156576 19 44295026 to 44295044 18 + TSS region transcription start site region 156576
Tssr156577 19 44295087 to 44295127 40 + TSS region transcription start site region 156577
Tssr156578 19 44296632 to 44296653 21 + TSS region transcription start site region 156578
Tssr156579 19 44296839 to 44296860 21 + TSS region transcription start site region 156579
Tssr156580 19 44298060 to 44298127 67 + TSS region transcription start site region 156580
Tssr156581 19 44301277 to 44301297 20 + TSS region transcription start site region 156581
Tssr156582 19 44301351 to 44301398 47 + TSS region transcription start site region 156582
Tssr156583 19 44302996 to 44303012 16 + TSS region transcription start site region 156583
Mir5114 19 44303171 to 44303231 60 + miRNA gene microRNA 5114
Tssr156584 19 44303201 to 44303218 17 + TSS region transcription start site region 156584
Tssr156585 19 44303239 to 44303255 16 + TSS region transcription start site region 156585
Tssr156586 19 44303301 to 44303310 9 + TSS region transcription start site region 156586
Tssr156587 19 44303336 to 44303346 10 + TSS region transcription start site region 156587
Tssr156588 19 44303347 to 44303412 65 + TSS region transcription start site region 156588
Tssr156589 19 44303444 to 44303455 11 + TSS region transcription start site region 156589
Tssr156590 19 44303468 to 44303477 9 + TSS region transcription start site region 156590
Tssr156591 19 44303538 to 44303560 22 + TSS region transcription start site region 156591
Tssr156592 19 44303813 to 44303833 20 + TSS region transcription start site region 156592
Tssr156593 19 44304597 to 44304617 20 + TSS region transcription start site region 156593