Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:43517299-43707321

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Got1 19 43499752 to 43524605 24853 - protein coding gene glutamic-oxaloacetic transaminase 1, soluble
Tssr159382 19 43521359 to 43521364 5 - TSS region transcription start site region 159382
Tssr156512 19 43523719 to 43523730 11 + TSS region transcription start site region 156512
Cpgi10863 19 43524196 to 43525276 1080 CpG island CpG island 10863
Tssr159383 19 43524369 to 43524373 4 - TSS region transcription start site region 159383
Tssr159384 19 43524462 to 43524580 118 - TSS region transcription start site region 159384
Tssr159385 19 43524756 to 43524761 5 - TSS region transcription start site region 159385
Tssr156513 19 43528325 to 43528332 7 + TSS region transcription start site region 156513
Tssr156514 19 43528340 to 43528351 11 + TSS region transcription start site region 156514
Tssr156515 19 43528360 to 43528373 13 + TSS region transcription start site region 156515
Gm19179 19 43544183 to 43544959 776 + pseudogene predicted gene, 19179
Gm34636 19 43545927 to 43568993 23066 - lncRNA gene predicted gene, 34636
Cpgi10864 19 43570997 to 43571451 454 CpG island CpG island 10864
Cpgi10865 19 43583604 to 43583812 208 CpG island CpG island 10865
Cpgi10866 19 43599688 to 43600108 420 CpG island CpG island 10866
Cpgi10867 19 43601000 to 43601869 869 CpG island CpG island 10867
Cpgi10868 19 43606687 to 43607255 568 CpG island CpG island 10868
Gm20467 19 43609077 to 43610625 1548 - lincRNA gene predicted gene 20467
Cpgi10869 19 43610246 to 43610904 658 CpG island CpG island 10869
Gm46656 19 43610832 to 43611890 1058 - lncRNA gene predicted gene, 46656
Cpgi10870 19 43612018 to 43612945 927 CpG island CpG island 10870
Tssr156516 19 43612299 to 43612321 22 + TSS region transcription start site region 156516
Nkx2-3 19 43612325 to 43615892 3567 + protein coding gene NK2 homeobox 3
Tssr156517 19 43612392 to 43612416 24 + TSS region transcription start site region 156517
Cpgi10871 19 43613954 to 43615399 1445 CpG island CpG island 10871
Cpgi10872 19 43615918 to 43616920 1002 CpG island CpG island 10872
Cpgi10873 19 43617045 to 43617197 152 CpG island CpG island 10873
Cpgi10874 19 43619977 to 43620370 393 CpG island CpG island 10874
Gm22646 19 43622446 to 43622560 114 + miRNA gene predicted gene, 22646
Gm4311 19 43637372 to 43642404 5032 - unclassified gene predicted gene 4311
Gm34922 19 43645554 to 43655630 10076 + lncRNA gene predicted gene, 34922
Tssr156518 19 43647480 to 43647485 5 + TSS region transcription start site region 156518
Slc25a28 19 43663822 to 43674881 11059 - protein coding gene solute carrier family 25, member 28
Cpgi10875 19 43674109 to 43676161 2052 CpG island CpG island 10875
Tssr159386 19 43674844 to 43674909 65 - TSS region transcription start site region 159386
Tssr156519 19 43675173 to 43675192 19 + TSS region transcription start site region 156519
BC037704 19 43675178 to 43677170 1992 + lncRNA gene cDNA sequence BC037704
Tssr156520 19 43675460 to 43675482 22 + TSS region transcription start site region 156520
Cpgi10876 19 43689388 to 43690276 888 CpG island CpG island 10876
Tssr156521 19 43689647 to 43689658 11 + TSS region transcription start site region 156521
Tssr156522 19 43689672 to 43689695 23 + TSS region transcription start site region 156522
Entpd7 19 43689672 to 43733697 44025 + protein coding gene ectonucleoside triphosphate diphosphohydrolase 7
Tssr156523 19 43689798 to 43689868 70 + TSS region transcription start site region 156523