MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 19:42278037-42436783

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tlsr8	19	25158638 to 42400477	17241839		QTL	thymic lymphoma suppressor region 8
Gm34347	19	42276887 to 42314626	37739	+	lncRNA gene	predicted gene, 34347
Mir3085	19	42280082 to 42280170	88	-	miRNA gene	microRNA 3085
Crtac1	19	42283037 to 42431783	148746	-	protein coding gene	cartilage acidic protein 1
Tssr159356	19	42298076 to 42298093	17	-	TSS region	transcription start site region 159356
Tssr156498	19	42306465 to 42306497	32	+	TSS region	transcription start site region 156498
Tssr159357	19	42307102 to 42307116	14	-	TSS region	transcription start site region 159357
Tssr5521	19	42307125 to 42307134	9	-	TSS region	transcription start site region 5521
Cpgi10850	19	42380636 to 42381173	537		CpG island	CpG island 10850
Gm41848	19	42387741 to 42397551	9810	-	lncRNA gene	predicted gene, 41848
D19Mit11.2	19	42394597 to 42394760	163		DNA segment	DNA segment, Chr 19, Massachusetts Institute of Technology 11.2
D19Mit11.1	19	42394609 to 42394755	146		DNA segment	DNA segment, Chr 19, Massachusetts Institute of Technology 11.1
D19Mit100	19	42400324 to 42400477	153		DNA segment	DNA segment, Chr 19, Massachusetts Institute of Technology 100
Gm34299	19	42402212 to 42413934	11722	+	lncRNA gene	predicted gene, 34299
Cpgi10851	19	42409248 to 42409459	211		CpG island	CpG island 10851
Cpgi10852	19	42430975 to 42432810	1835		CpG island	CpG island 10852
Tssr159358	19	42431747 to 42431760	13	-	TSS region	transcription start site region 159358
Tssr159359	19	42431778 to 42431792	14	-	TSS region	transcription start site region 159359