Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:42276778-42586792

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tlsr8 19 25158638 to 42400477 17241839 QTL thymic lymphoma suppressor region 8
Gm34347 19 42276887 to 42314626 37739 + lncRNA gene predicted gene, 34347
Mir3085 19 42280082 to 42280170 88 - miRNA gene microRNA 3085
Crtac1 19 42283037 to 42431783 148746 - protein coding gene cartilage acidic protein 1
Tssr159356 19 42298076 to 42298093 17 - TSS region transcription start site region 159356
Tssr156498 19 42306465 to 42306497 32 + TSS region transcription start site region 156498
Tssr159357 19 42307102 to 42307116 14 - TSS region transcription start site region 159357
Tssr5521 19 42307125 to 42307134 9 - TSS region transcription start site region 5521
Cpgi10850 19 42380636 to 42381173 537 CpG island CpG island 10850
Gm41848 19 42387741 to 42397551 9810 - lncRNA gene predicted gene, 41848
D19Mit11.2 19 42394597 to 42394760 163 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 11.2
D19Mit11.1 19 42394609 to 42394755 146 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 11.1
D19Mit100 19 42400324 to 42400477 153 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 100
Gm34299 19 42402212 to 42413934 11722 + lncRNA gene predicted gene, 34299
Cpgi10851 19 42409248 to 42409459 211 CpG island CpG island 10851
Cpgi10852 19 42430975 to 42432810 1835 CpG island CpG island 10852
Tssr159358 19 42431747 to 42431760 13 - TSS region transcription start site region 159358
Tssr159359 19 42431778 to 42431792 14 - TSS region transcription start site region 159359
D19Mit120 19 42438478 to 42438566 88 DNA segment DNA Segment, Chr 19 Massachusetts Institute of Technology 120
Ath16 19 42438478 to 42438566 88 QTL atherosclerosis 16
Gm41849 19 42444057 to 42448376 4319 + lncRNA gene predicted gene, 41849
Gm41850 19 42483124 to 42486499 3375 - lncRNA gene predicted gene, 41850
D19Mit48 19 42487675 to 42487878 203 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 48
Gm41851 19 42509119 to 42512197 3078 - lncRNA gene predicted gene, 41851
Cpgi10853 19 42518412 to 42519329 917 CpG island CpG island 10853
R3hcc1l 19 42518759 to 42592343 73584 + protein coding gene R3H domain and coiled-coil containing 1 like
Tssr156499 19 42518770 to 42518794 24 + TSS region transcription start site region 156499
Tssr156500 19 42518795 to 42518830 35 + TSS region transcription start site region 156500
Tssr156501 19 42524864 to 42524866 2 + TSS region transcription start site region 156501
Tssr156502 19 42531306 to 42531314 8 + TSS region transcription start site region 156502
Gm16541 19 42536850 to 42563108 26258 - antisense lncRNA gene predicted gene 16541
Tssr156503 19 42550936 to 42550940 4 + TSS region transcription start site region 156503
B230214N19Rik 19 42551569 to 42552163 594 unclassified gene RIKEN cDNA B230214N19 gene
Tssr159360 19 42563065 to 42563098 33 - TSS region transcription start site region 159360
2810404I24Rik 19 42566035 to 42567961 1926 unclassified gene RIKEN cDNA 2810404I24 gene
D19Car3 19 42566563 to 42566663 100 DNA segment DNA segment, Chr 19, Carle 3