Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:4191706-4213240

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi10390 19 4191616 to 4192850 1234 CpG island CpG island 10390
Tssr154292 19 4192120 to 4192125 5 + TSS region transcription start site region 154292
Tssr154293 19 4192129 to 4192217 88 + TSS region transcription start site region 154293
Ppp1ca 19 4192174 to 4195419 3245 + protein coding gene protein phosphatase 1 catalytic subunit alpha
Tssr154294 19 4193101 to 4193130 29 + TSS region transcription start site region 154294
Tssr154295 19 4194622 to 4194647 25 + TSS region transcription start site region 154295
Tssr154296 19 4195028 to 4195057 29 + TSS region transcription start site region 154296
Rad9a 19 4195198 to 4201603 6405 - protein coding gene RAD9 checkpoint clamp component A
Cpgi10391 19 4201227 to 4201974 747 CpG island CpG island 10391
Tssr157469 19 4201375 to 4201425 50 - TSS region transcription start site region 157469
Tssr157470 19 4201571 to 4201589 18 - TSS region transcription start site region 157470
Tssr157471 19 4201591 to 4201623 32 - TSS region transcription start site region 157471
Gm30082 19 4201706 to 4203240 1534 + lncRNA gene predicted gene, 30082
Tssr154297 19 4201797 to 4201816 19 + TSS region transcription start site region 154297
Tssr154298 19 4204194 to 4204207 13 + TSS region transcription start site region 154298
Tssr154299 19 4204211 to 4204221 10 + TSS region transcription start site region 154299