Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:41485257-41858665

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lcor 19 41482645 to 41562246 79601 + protein coding gene ligand dependent nuclear receptor corepressor
Tssr156431 19 41495113 to 41495115 2 + TSS region transcription start site region 156431
Morf4l1b 19 41525252 to 41526961 1709 + protein coding gene mortality factor 4 like 1B
Gm340 19 41582370 to 41586536 4166 + protein coding gene predicted gene 340
Mir8091 19 41588651 to 41588789 138 + miRNA gene microRNA 8091
AI606181 19 41593363 to 41596158 2795 + protein coding gene expressed sequence AI606181
Slit1 19 41600257 to 41743665 143408 - protein coding gene slit guidance ligand 1
Cpgi10832 19 41600364 to 41600692 328 CpG island CpG island 10832
Tssr159310 19 41665978 to 41665979 1 - TSS region transcription start site region 159310
Tssr159311 19 41665988 to 41666017 29 - TSS region transcription start site region 159311
Tssr159312 19 41666023 to 41666029 6 - TSS region transcription start site region 159312
Gm34116 19 41691154 to 41702436 11282 + lncRNA gene predicted gene, 34116
Tssr156432 19 41691352 to 41691369 17 + TSS region transcription start site region 156432
Cpgi10833 19 41742902 to 41743982 1080 CpG island CpG island 10833
Tssr159313 19 41743644 to 41743662 18 - TSS region transcription start site region 159313
Tssr159314 19 41743665 to 41743706 41 - TSS region transcription start site region 159314
Gm22601 19 41744804 to 41745053 249 + unclassified non-coding RNA gene predicted gene, 22601
Gm19424 19 41746961 to 41750097 3136 + lncRNA gene predicted gene, 19424
Tssr159315 19 41747575 to 41747584 9 - TSS region transcription start site region 159315
Tssr159316 19 41747602 to 41747606 4 - TSS region transcription start site region 159316
Arhgap19 19 41766588 to 41802084 35496 - protein coding gene Rho GTPase activating protein 19
Tssr159317 19 41774107 to 41774167 60 - TSS region transcription start site region 159317
Tssr159318 19 41774182 to 41774195 13 - TSS region transcription start site region 159318
Tssr159319 19 41774564 to 41774591 27 - TSS region transcription start site region 159319
Tssr159320 19 41794994 to 41795032 38 - TSS region transcription start site region 159320
Cpgi10834 19 41801587 to 41802293 706 CpG island CpG island 10834
Tssr159321 19 41802028 to 41802060 32 - TSS region transcription start site region 159321
Gm41847 19 41807949 to 41819642 11693 - lncRNA gene predicted gene, 41847
Cpgi10835 19 41829663 to 41831323 1660 CpG island CpG island 10835
Frat1 19 41829970 to 41832583 2613 + protein coding gene frequently rearranged in advanced T cell lymphomas
Tssr156433 19 41829994 to 41830026 32 + TSS region transcription start site region 156433
Tssr156434 19 41830027 to 41830049 22 + TSS region transcription start site region 156434
Tssr156435 19 41831272 to 41831276 4 + TSS region transcription start site region 156435
Frat2 19 41845972 to 41848132 2160 - protein coding gene frequently rearranged in advanced T cell lymphomas 2
Cpgi10836 19 41846832 to 41848585 1753 CpG island CpG island 10836
Tssr159322 19 41848055 to 41848066 11 - TSS region transcription start site region 159322
Tssr159323 19 41848076 to 41848111 35 - TSS region transcription start site region 159323
Tssr159324 19 41848233 to 41848246 13 - TSS region transcription start site region 159324
Tssr159325 19 41848290 to 41848310 20 - TSS region transcription start site region 159325
Tssr156436 19 41848512 to 41848515 3 + TSS region transcription start site region 156436
Tssr156437 19 41848788 to 41848803 15 + TSS region transcription start site region 156437