Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:41378651-41798789

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pik3ap1 19 41274218 to 41385070 110852 - protein coding gene phosphoinositide-3-kinase adaptor protein 1
Tssr156425 19 41382983 to 41382995 12 + TSS region transcription start site region 156425
Cpgi10829 19 41384730 to 41385616 886 CpG island CpG island 10829
Tssr159307 19 41385075 to 41385086 11 - TSS region transcription start site region 159307
Tssr159308 19 41385089 to 41385109 20 - TSS region transcription start site region 159308
Tssr5514 19 41389017 to 41389021 4 - TSS region transcription start site region 5514
D19Mit66 19 41434981 to 41435088 107 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 66
Cpgi10830 19 41442225 to 41442484 259 CpG island CpG island 10830
Gm33951 19 41443382 to 41445082 1700 - lncRNA gene predicted gene, 33951
Gm9788 19 41459813 to 41460718 905 + pseudogene predicted pseudogene 9788
Tssr159309 19 41474927 to 41474933 6 - TSS region transcription start site region 159309
Tssr156426 19 41475929 to 41475933 4 + TSS region transcription start site region 156426
2010100M03Rik 19 41481253 to 41482184 931 unclassified gene RIKEN cDNA 2010100M03 gene
Cpgi10831 19 41482141 to 41483900 1759 CpG island CpG island 10831
Tssr156427 19 41482632 to 41482688 56 + TSS region transcription start site region 156427
Lcor 19 41482645 to 41562246 79601 + protein coding gene ligand dependent nuclear receptor corepressor
Tssr156428 19 41482956 to 41483004 48 + TSS region transcription start site region 156428
Tssr156429 19 41483101 to 41483144 43 + TSS region transcription start site region 156429
Tssr156430 19 41483203 to 41483221 18 + TSS region transcription start site region 156430
Tssr156431 19 41495113 to 41495115 2 + TSS region transcription start site region 156431
Morf4l1b 19 41525252 to 41526961 1709 + protein coding gene mortality factor 4 like 1B
Gm340 19 41582370 to 41586536 4166 + protein coding gene predicted gene 340
Mir8091 19 41588651 to 41588789 138 + miRNA gene microRNA 8091
AI606181 19 41593363 to 41596158 2795 + protein coding gene expressed sequence AI606181
Slit1 19 41600257 to 41743665 143408 - protein coding gene slit guidance ligand 1
Cpgi10832 19 41600364 to 41600692 328 CpG island CpG island 10832
Tssr159310 19 41665978 to 41665979 1 - TSS region transcription start site region 159310
Tssr159311 19 41665988 to 41666017 29 - TSS region transcription start site region 159311
Tssr159312 19 41666023 to 41666029 6 - TSS region transcription start site region 159312
Gm34116 19 41691154 to 41702436 11282 + lncRNA gene predicted gene, 34116
Tssr156432 19 41691352 to 41691369 17 + TSS region transcription start site region 156432
Cpgi10833 19 41742902 to 41743982 1080 CpG island CpG island 10833
Tssr159313 19 41743644 to 41743662 18 - TSS region transcription start site region 159313
Tssr159314 19 41743665 to 41743706 41 - TSS region transcription start site region 159314
Gm22601 19 41744804 to 41745053 249 + unclassified non-coding RNA gene predicted gene, 22601
Gm19424 19 41746961 to 41750097 3136 + lncRNA gene predicted gene, 19424
Tssr159315 19 41747575 to 41747584 9 - TSS region transcription start site region 159315
Tssr159316 19 41747602 to 41747606 4 - TSS region transcription start site region 159316
Arhgap19 19 41766588 to 41802084 35496 - protein coding gene Rho GTPase activating protein 19
Tssr159317 19 41774107 to 41774167 60 - TSS region transcription start site region 159317
Tssr159318 19 41774182 to 41774195 13 - TSS region transcription start site region 159318
Tssr159319 19 41774564 to 41774591 27 - TSS region transcription start site region 159319
Tssr159320 19 41794994 to 41795032 38 - TSS region transcription start site region 159320