Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:40877063-41277078

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90 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi10822 19 40894070 to 40895574 1504 CpG island CpG island 10822
Tssr156405 19 40894152 to 40894163 11 + TSS region transcription start site region 156405
Tssr159223 19 40894603 to 40894641 38 - TSS region transcription start site region 159223
Tssr156406 19 40894692 to 40894736 44 + TSS region transcription start site region 156406
Mir8092 19 40894703 to 40894789 86 + miRNA gene microRNA 8092
Zfp518a 19 40894705 to 40917947 23242 + protein coding gene zinc finger protein 518A
Tssr156407 19 40908665 to 40908673 8 + TSS region transcription start site region 156407
Blnk 19 40928927 to 40994535 65608 - protein coding gene B cell linker
D19Mit121 19 40938133 to 40938256 123 DNA segment DNA Segment, Chr 19 Massachusetts Institute of Technology 121
Tssr156408 19 40940213 to 40940230 17 + TSS region transcription start site region 156408
Tssr159224 19 40940217 to 40940229 12 - TSS region transcription start site region 159224
Tssr156409 19 40945481 to 40945491 10 + TSS region transcription start site region 156409
Tssr159225 19 40953333 to 40953354 21 - TSS region transcription start site region 159225
Tssr159226 19 40954023 to 40954033 10 - TSS region transcription start site region 159226
Tssr159227 19 40955562 to 40955591 29 - TSS region transcription start site region 159227
Tssr159228 19 40955604 to 40955627 23 - TSS region transcription start site region 159228
Tssr159229 19 40959725 to 40959742 17 - TSS region transcription start site region 159229
Tssr159230 19 40959750 to 40959762 12 - TSS region transcription start site region 159230
Cpgi10823 19 40962274 to 40962593 319 CpG island CpG island 10823
Tssr156410 19 40965764 to 40965770 6 + TSS region transcription start site region 156410
Tssr159231 19 40977076 to 40977088 12 - TSS region transcription start site region 159231
Tssr156411 19 40993196 to 40993210 14 + TSS region transcription start site region 156411
Tssr159232 19 40994133 to 40994144 11 - TSS region transcription start site region 159232
Tssr159233 19 40994155 to 40994181 26 - TSS region transcription start site region 159233
Tssr159234 19 40994189 to 40994200 11 - TSS region transcription start site region 159234
Tssr159235 19 40994211 to 40994227 16 - TSS region transcription start site region 159235
Tssr159236 19 40994254 to 40994272 18 - TSS region transcription start site region 159236
Tssr159237 19 40994278 to 40994289 11 - TSS region transcription start site region 159237
Tssr159238 19 40996121 to 40996136 15 - TSS region transcription start site region 159238
Tssr159239 19 41000486 to 41000487 1 - TSS region transcription start site region 159239
C330026H20Rik 19 41004815 to 41014643 9828 - lncRNA gene RIKEN cDNA C330026H20 gene
Tssr159240 19 41011676 to 41011680 4 - TSS region transcription start site region 159240
Gm4269 19 41017683 to 41020295 2612 + pseudogene predicted gene 4269
Tssr159241 19 41020668 to 41020674 6 - TSS region transcription start site region 159241
Dntt 19 41029275 to 41059523 30248 + protein coding gene deoxynucleotidyltransferase, terminal
Tssr156412 19 41029379 to 41029398 19 + TSS region transcription start site region 156412
Tssr159242 19 41031122 to 41031136 14 - TSS region transcription start site region 159242
Tssr159243 19 41031152 to 41031163 11 - TSS region transcription start site region 159243
Tssr159244 19 41031173 to 41031180 7 - TSS region transcription start site region 159244
Tssr159245 19 41031182 to 41031193 11 - TSS region transcription start site region 159245
Tssr5510 19 41031211 to 41031216 5 - TSS region transcription start site region 5510
Tssr159246 19 41032045 to 41032056 11 - TSS region transcription start site region 159246
Tssr159247 19 41032059 to 41032068 9 - TSS region transcription start site region 159247
Tssr156413 19 41044873 to 41044882 9 + TSS region transcription start site region 156413
Tssr156414 19 41050407 to 41050421 14 + TSS region transcription start site region 156414
Opalin 19 41063420 to 41077113 13693 - protein coding gene oligodendrocytic myelin paranodal and inner loop protein
Tssr159248 19 41077063 to 41077078 15 - TSS region transcription start site region 159248
Tssr159249 19 41077106 to 41077118 12 - TSS region transcription start site region 159249
Tll2 19 41083981 to 41206774 122793 - protein coding gene tolloid-like 2
Cpgi10824 19 41088512 to 41088775 263 CpG island CpG island 10824
Cpgi10825 19 41206031 to 41207350 1319 CpG island CpG island 10825
Tssr159250 19 41206860 to 41206898 38 - TSS region transcription start site region 159250
Tm9sf3 19 41210842 to 41264004 53162 - protein coding gene transmembrane 9 superfamily member 3
Tssr159251 19 41214354 to 41214368 14 - TSS region transcription start site region 159251
Tssr159252 19 41214535 to 41214559 24 - TSS region transcription start site region 159252
Tssr159253 19 41217415 to 41217428 13 - TSS region transcription start site region 159253
Tssr159254 19 41232427 to 41232449 22 - TSS region transcription start site region 159254
Gm46651 19 41259566 to 41263709 4143 - lncRNA gene predicted gene, 46651
Tssr159255 19 41262523 to 41262527 4 - TSS region transcription start site region 159255
Cpgi10826 19 41263102 to 41264420 1318 CpG island CpG island 10826
Tssr156415 19 41263343 to 41263378 35 + TSS region transcription start site region 156415
Tssr5511 19 41263407 to 41263423 16 + TSS region transcription start site region 5511
Tssr156416 19 41263772 to 41263781 9 + TSS region transcription start site region 156416
Tssr159256 19 41263917 to 41263922 5 - TSS region transcription start site region 159256
Tssr159257 19 41263931 to 41264008 77 - TSS region transcription start site region 159257
Tssr159258 19 41264019 to 41264054 35 - TSS region transcription start site region 159258
1700008F19Rik 19 41264111 to 41265029 918 unclassified gene RIKEN cDNA 1700008F19 gene
Tssr156417 19 41264115 to 41264182 67 + TSS region transcription start site region 156417
Tssr159259 19 41264286 to 41264289 3 - TSS region transcription start site region 159259
Tssr159260 19 41264299 to 41264304 5 - TSS region transcription start site region 159260
Tssr159261 19 41264313 to 41264323 10 - TSS region transcription start site region 159261
Tssr159262 19 41264325 to 41264338 13 - TSS region transcription start site region 159262
Tssr159263 19 41264345 to 41264363 18 - TSS region transcription start site region 159263
Tssr159264 19 41273157 to 41273171 14 - TSS region transcription start site region 159264
Tssr159265 19 41273235 to 41273251 16 - TSS region transcription start site region 159265
Tssr159266 19 41273265 to 41273278 13 - TSS region transcription start site region 159266
Tssr156418 19 41273595 to 41273630 35 + TSS region transcription start site region 156418
Tssr159267 19 41273650 to 41273662 12 - TSS region transcription start site region 159267
Tssr159268 19 41273721 to 41273738 17 - TSS region transcription start site region 159268
Tssr159269 19 41273755 to 41273768 13 - TSS region transcription start site region 159269
Tssr159270 19 41273782 to 41273798 16 - TSS region transcription start site region 159270
Tssr159271 19 41273871 to 41273882 11 - TSS region transcription start site region 159271
Pik3ap1 19 41274218 to 41385070 110852 - protein coding gene phosphoinositide-3-kinase adaptor protein 1
Tssr159272 19 41274318 to 41274344 26 - TSS region transcription start site region 159272
Tssr159273 19 41275947 to 41275971 24 - TSS region transcription start site region 159273
D19Mit119 19 41276528 to 41276787 259 DNA segment DNA Segment, Chr 19 Massachusetts Institute of Technology 119
Tssr159274 19 41276808 to 41276852 44 - TSS region transcription start site region 159274
Tssr159275 19 41276890 to 41276915 25 - TSS region transcription start site region 159275
Tssr159276 19 41276947 to 41276968 21 - TSS region transcription start site region 159276
Tssr159277 19 41277021 to 41277061 40 - TSS region transcription start site region 159277