Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:40769152-41019163

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cc2d2b 19 40754741 to 40829057 74316 + protein coding gene coiled-coil and C2 domain containing 2B
Tssr159219 19 40769535 to 40769557 22 - TSS region transcription start site region 159219
Gm33482 19 40816765 to 40818268 1503 - lncRNA gene predicted gene, 33482
Tssr159220 19 40821456 to 40821463 7 - TSS region transcription start site region 159220
Tssr159221 19 40821471 to 40821478 7 - TSS region transcription start site region 159221
Tssr159222 19 40821492 to 40821512 20 - TSS region transcription start site region 159222
Tssr156398 19 40829091 to 40829092 1 + TSS region transcription start site region 156398
Gm9099 19 40830521 to 40831854 1333 unclassified gene predicted gene 9099
Tssr156399 19 40830564 to 40830594 30 + TSS region transcription start site region 156399
Cpgi10820 19 40830668 to 40832325 1657 CpG island CpG island 10820
Tssr156400 19 40831248 to 40831292 44 + TSS region transcription start site region 156400
Ccnj 19 40831279 to 40848572 17293 + protein coding gene cyclin J
Tssr156401 19 40831296 to 40831313 17 + TSS region transcription start site region 156401
Tssr156402 19 40831964 to 40832018 54 + TSS region transcription start site region 156402
Tssr156403 19 40840721 to 40840758 37 + TSS region transcription start site region 156403
Tssr156404 19 40846560 to 40846563 3 + TSS region transcription start site region 156404
E030044B06Rik 19 40868386 to 40874071 5685 + lincRNA gene RIKEN cDNA E030044B06 gene
Cpgi10821 19 40873003 to 40873704 701 CpG island CpG island 10821
Cpgi10822 19 40894070 to 40895574 1504 CpG island CpG island 10822
Tssr156405 19 40894152 to 40894163 11 + TSS region transcription start site region 156405
Tssr159223 19 40894603 to 40894641 38 - TSS region transcription start site region 159223
Tssr156406 19 40894692 to 40894736 44 + TSS region transcription start site region 156406
Mir8092 19 40894703 to 40894789 86 + miRNA gene microRNA 8092
Zfp518a 19 40894705 to 40917947 23242 + protein coding gene zinc finger protein 518A
Tssr156407 19 40908665 to 40908673 8 + TSS region transcription start site region 156407
Blnk 19 40928927 to 40994535 65608 - protein coding gene B cell linker
D19Mit121 19 40938133 to 40938256 123 DNA segment DNA Segment, Chr 19 Massachusetts Institute of Technology 121
Tssr156408 19 40940213 to 40940230 17 + TSS region transcription start site region 156408
Tssr159224 19 40940217 to 40940229 12 - TSS region transcription start site region 159224
Tssr156409 19 40945481 to 40945491 10 + TSS region transcription start site region 156409
Tssr159225 19 40953333 to 40953354 21 - TSS region transcription start site region 159225
Tssr159226 19 40954023 to 40954033 10 - TSS region transcription start site region 159226
Tssr159227 19 40955562 to 40955591 29 - TSS region transcription start site region 159227
Tssr159228 19 40955604 to 40955627 23 - TSS region transcription start site region 159228
Tssr159229 19 40959725 to 40959742 17 - TSS region transcription start site region 159229
Tssr159230 19 40959750 to 40959762 12 - TSS region transcription start site region 159230
Cpgi10823 19 40962274 to 40962593 319 CpG island CpG island 10823
Tssr156410 19 40965764 to 40965770 6 + TSS region transcription start site region 156410
Tssr159231 19 40977076 to 40977088 12 - TSS region transcription start site region 159231
Tssr156411 19 40993196 to 40993210 14 + TSS region transcription start site region 156411
Tssr159232 19 40994133 to 40994144 11 - TSS region transcription start site region 159232
Tssr159233 19 40994155 to 40994181 26 - TSS region transcription start site region 159233
Tssr159234 19 40994189 to 40994200 11 - TSS region transcription start site region 159234
Tssr159235 19 40994211 to 40994227 16 - TSS region transcription start site region 159235
Tssr159236 19 40994254 to 40994272 18 - TSS region transcription start site region 159236
Tssr159237 19 40994278 to 40994289 11 - TSS region transcription start site region 159237
Tssr159238 19 40996121 to 40996136 15 - TSS region transcription start site region 159238
Tssr159239 19 41000486 to 41000487 1 - TSS region transcription start site region 159239
C330026H20Rik 19 41004815 to 41014643 9828 - lncRNA gene RIKEN cDNA C330026H20 gene
Tssr159240 19 41011676 to 41011680 4 - TSS region transcription start site region 159240
Gm4269 19 41017683 to 41020295 2612 + pseudogene predicted gene 4269