MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 19:4067539-4097545

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm42060	19	4067251 to 4071445	4194	-	lncRNA gene	predicted gene, 42060
Tssr157444	19	4069089 to 4069112	23	-	TSS region	transcription start site region 157444
Tssr157445	19	4069225 to 4069239	14	-	TSS region	transcription start site region 157445
Gm23927	19	4078298 to 4078512	214	-	snoRNA gene	predicted gene, 23927
Tssr154256	19	4081434 to 4081467	33	+	TSS region	transcription start site region 154256
Tssr154257	19	4081565 to 4081583	18	+	TSS region	transcription start site region 154257
Cabp2	19	4081578 to 4087340	5762	+	protein coding gene	calcium binding protein 2
Tssr154258	19	4082473 to 4082517	44	+	TSS region	transcription start site region 154258
Tssr154259	19	4082518 to 4082533	15	+	TSS region	transcription start site region 154259
Tssr154260	19	4082539 to 4082545	6	+	TSS region	transcription start site region 154260
Cpgi10382	19	4096535 to 4097960	1425		CpG island	CpG island 10382
Tssr154261	19	4096880 to 4096945	65	+	TSS region	transcription start site region 154261
Cdk2ap2	19	4097182 to 4099019	1837	+	protein coding gene	CDK2-associated protein 2
Tssr154262	19	4097337 to 4097356	19	+	TSS region	transcription start site region 154262
Tssr154263	19	4097369 to 4097386	17	+	TSS region	transcription start site region 154263
Tssr154264	19	4097392 to 4097415	23	+	TSS region	transcription start site region 154264
Tssr154265	19	4097422 to 4097432	10	+	TSS region	transcription start site region 154265
Tssr154266	19	4097445 to 4097451	6	+	TSS region	transcription start site region 154266