Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:40498489-40678502

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sorbs1 19 40294753 to 40513779 219026 - protein coding gene sorbin and SH3 domain containing 1
Tssr159195 19 40508997 to 40509014 17 - TSS region transcription start site region 159195
Tssr159196 19 40509046 to 40509059 13 - TSS region transcription start site region 159196
Tssr159197 19 40511820 to 40511823 3 - TSS region transcription start site region 159197
Tssr159198 19 40512081 to 40512086 5 - TSS region transcription start site region 159198
Cpgi10816 19 40512913 to 40514093 1180 CpG island CpG island 10816
Tssr159199 19 40513714 to 40513792 78 - TSS region transcription start site region 159199
Tssr159200 19 40513833 to 40513880 47 - TSS region transcription start site region 159200
D19Jpk1 19 40545423 to 40545582 159 DNA segment DNA segment, Chr 19, Japan, Kominami 1
Aldh18a1 19 40550257 to 40588463 38206 - protein coding gene aldehyde dehydrogenase 18 family, member A1
Gm15801 19 40560537 to 40561058 521 - pseudogene predicted gene 15801
Tssr159201 19 40561746 to 40561764 18 - TSS region transcription start site region 159201
Tssr159202 19 40564973 to 40564987 14 - TSS region transcription start site region 159202
Tssr159203 19 40564995 to 40565013 18 - TSS region transcription start site region 159203
Tssr159204 19 40565042 to 40565058 16 - TSS region transcription start site region 159204
Cpgi10817 19 40587826 to 40588678 852 CpG island CpG island 10817
Tssr159205 19 40588338 to 40588371 33 - TSS region transcription start site region 159205
Tssr159206 19 40588374 to 40588426 52 - TSS region transcription start site region 159206
Tssr159207 19 40588428 to 40588439 11 - TSS region transcription start site region 159207
Tssr159208 19 40588453 to 40588464 11 - TSS region transcription start site region 159208
Tssr159209 19 40588470 to 40588471 1 - TSS region transcription start site region 159209
Tssr159210 19 40588489 to 40588502 13 - TSS region transcription start site region 159210
Gm27042 19 40589435 to 40594862 5427 + lincRNA gene predicted gene, 27042
Tctn3 19 40596446 to 40612233 15787 - protein coding gene tectonic family member 3
Cpgi10818 19 40611631 to 40612520 889 CpG island CpG island 10818
Tssr159211 19 40612160 to 40612255 95 - TSS region transcription start site region 159211
Tssr156370 19 40612356 to 40612373 17 + TSS region transcription start site region 156370
Entpd1 19 40612366 to 40741602 129236 + protein coding gene ectonucleoside triphosphate diphosphohydrolase 1
Tssr156371 19 40612392 to 40612407 15 + TSS region transcription start site region 156371
Gm16027 19 40615886 to 40616643 757 + pseudogene predicted gene 16027
Gm8783 19 40622460 to 40622981 521 + pseudogene predicted pseudogene 8783
Tssr5506 19 40637775 to 40637784 9 - TSS region transcription start site region 5506
Tssr159212 19 40638729 to 40638738 9 - TSS region transcription start site region 159212
Tssr159213 19 40638766 to 40638775 9 - TSS region transcription start site region 159213
Tssr156372 19 40638851 to 40638854 3 + TSS region transcription start site region 156372
Tssr156373 19 40640055 to 40640058 3 + TSS region transcription start site region 156373
Gm33305 19 40658272 to 40661201 2929 - lncRNA gene predicted gene, 33305
Tssr156374 19 40659455 to 40659462 7 + TSS region transcription start site region 156374
Tssr156375 19 40659660 to 40659689 29 + TSS region transcription start site region 156375
Tssr156376 19 40659785 to 40659802 17 + TSS region transcription start site region 156376
Tssr156377 19 40660142 to 40660170 28 + TSS region transcription start site region 156377
Tssr156378 19 40660171 to 40660182 11 + TSS region transcription start site region 156378
Tssr156379 19 40660484 to 40660498 14 + TSS region transcription start site region 156379
Tssr156380 19 40660651 to 40660664 13 + TSS region transcription start site region 156380
Tssr156381 19 40660675 to 40660694 19 + TSS region transcription start site region 156381
Tssr159214 19 40661246 to 40661261 15 - TSS region transcription start site region 159214
Tssr156382 19 40661288 to 40661304 16 + TSS region transcription start site region 156382
Tssr156383 19 40665213 to 40665225 12 + TSS region transcription start site region 156383
Tssr159215 19 40665919 to 40665931 12 - TSS region transcription start site region 159215
Tssr159216 19 40665941 to 40665950 9 - TSS region transcription start site region 159216
Tssr5507 19 40665961 to 40665966 5 - TSS region transcription start site region 5507
Tssr156384 19 40667232 to 40667243 11 + TSS region transcription start site region 156384
Tssr156385 19 40667607 to 40667612 5 + TSS region transcription start site region 156385