Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:40462366-40891602

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96 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sorbs1 19 40294753 to 40513779 219026 - protein coding gene sorbin and SH3 domain containing 1
5730409N24Rik 19 40472754 to 40474429 1675 unclassified gene RIKEN cDNA 5730409N24 gene
9130009M17Rik 19 40474596 to 40476538 1942 unclassified gene RIKEN cDNA 9130009M17 gene
Tssr5505 19 40476535 to 40476570 35 - TSS region transcription start site region 5505
Tssr159191 19 40487541 to 40487566 25 - TSS region transcription start site region 159191
Tssr159192 19 40487568 to 40487591 23 - TSS region transcription start site region 159192
Tssr159193 19 40496998 to 40497005 7 - TSS region transcription start site region 159193
Tssr159194 19 40497013 to 40497024 11 - TSS region transcription start site region 159194
Tssr159195 19 40508997 to 40509014 17 - TSS region transcription start site region 159195
Tssr159196 19 40509046 to 40509059 13 - TSS region transcription start site region 159196
Tssr159197 19 40511820 to 40511823 3 - TSS region transcription start site region 159197
Tssr159198 19 40512081 to 40512086 5 - TSS region transcription start site region 159198
Cpgi10816 19 40512913 to 40514093 1180 CpG island CpG island 10816
Tssr159199 19 40513714 to 40513792 78 - TSS region transcription start site region 159199
Tssr159200 19 40513833 to 40513880 47 - TSS region transcription start site region 159200
D19Jpk1 19 40545423 to 40545582 159 DNA segment DNA segment, Chr 19, Japan, Kominami 1
Aldh18a1 19 40550257 to 40588463 38206 - protein coding gene aldehyde dehydrogenase 18 family, member A1
Gm15801 19 40560537 to 40561058 521 - pseudogene predicted gene 15801
Tssr159201 19 40561746 to 40561764 18 - TSS region transcription start site region 159201
Tssr159202 19 40564973 to 40564987 14 - TSS region transcription start site region 159202
Tssr159203 19 40564995 to 40565013 18 - TSS region transcription start site region 159203
Tssr159204 19 40565042 to 40565058 16 - TSS region transcription start site region 159204
Cpgi10817 19 40587826 to 40588678 852 CpG island CpG island 10817
Tssr159205 19 40588338 to 40588371 33 - TSS region transcription start site region 159205
Tssr159206 19 40588374 to 40588426 52 - TSS region transcription start site region 159206
Tssr159207 19 40588428 to 40588439 11 - TSS region transcription start site region 159207
Tssr159208 19 40588453 to 40588464 11 - TSS region transcription start site region 159208
Tssr159209 19 40588470 to 40588471 1 - TSS region transcription start site region 159209
Tssr159210 19 40588489 to 40588502 13 - TSS region transcription start site region 159210
Gm27042 19 40589435 to 40594862 5427 + lincRNA gene predicted gene, 27042
Tctn3 19 40596446 to 40612233 15787 - protein coding gene tectonic family member 3
Cpgi10818 19 40611631 to 40612520 889 CpG island CpG island 10818
Tssr159211 19 40612160 to 40612255 95 - TSS region transcription start site region 159211
Tssr156370 19 40612356 to 40612373 17 + TSS region transcription start site region 156370
Entpd1 19 40612366 to 40741602 129236 + protein coding gene ectonucleoside triphosphate diphosphohydrolase 1
Tssr156371 19 40612392 to 40612407 15 + TSS region transcription start site region 156371
Gm16027 19 40615886 to 40616643 757 + pseudogene predicted gene 16027
Gm8783 19 40622460 to 40622981 521 + pseudogene predicted pseudogene 8783
Tssr5506 19 40637775 to 40637784 9 - TSS region transcription start site region 5506
Tssr159212 19 40638729 to 40638738 9 - TSS region transcription start site region 159212
Tssr159213 19 40638766 to 40638775 9 - TSS region transcription start site region 159213
Tssr156372 19 40638851 to 40638854 3 + TSS region transcription start site region 156372
Tssr156373 19 40640055 to 40640058 3 + TSS region transcription start site region 156373
Gm33305 19 40658272 to 40661201 2929 - lncRNA gene predicted gene, 33305
Tssr156374 19 40659455 to 40659462 7 + TSS region transcription start site region 156374
Tssr156375 19 40659660 to 40659689 29 + TSS region transcription start site region 156375
Tssr156376 19 40659785 to 40659802 17 + TSS region transcription start site region 156376
Tssr156377 19 40660142 to 40660170 28 + TSS region transcription start site region 156377
Tssr156378 19 40660171 to 40660182 11 + TSS region transcription start site region 156378
Tssr156379 19 40660484 to 40660498 14 + TSS region transcription start site region 156379
Tssr156380 19 40660651 to 40660664 13 + TSS region transcription start site region 156380
Tssr156381 19 40660675 to 40660694 19 + TSS region transcription start site region 156381
Tssr159214 19 40661246 to 40661261 15 - TSS region transcription start site region 159214
Tssr156382 19 40661288 to 40661304 16 + TSS region transcription start site region 156382
Tssr156383 19 40665213 to 40665225 12 + TSS region transcription start site region 156383
Tssr159215 19 40665919 to 40665931 12 - TSS region transcription start site region 159215
Tssr159216 19 40665941 to 40665950 9 - TSS region transcription start site region 159216
Tssr5507 19 40665961 to 40665966 5 - TSS region transcription start site region 5507
Tssr156384 19 40667232 to 40667243 11 + TSS region transcription start site region 156384
Tssr156385 19 40667607 to 40667612 5 + TSS region transcription start site region 156385
Tssr5508 19 40678780 to 40678816 36 + TSS region transcription start site region 5508
Tssr156386 19 40679319 to 40679339 20 + TSS region transcription start site region 156386
Tssr156387 19 40679568 to 40679583 15 + TSS region transcription start site region 156387
Tssr156388 19 40679599 to 40679617 18 + TSS region transcription start site region 156388
Tssr156389 19 40679678 to 40679685 7 + TSS region transcription start site region 156389
Tssr159217 19 40699781 to 40699786 5 - TSS region transcription start site region 159217
Tssr156390 19 40705913 to 40705926 13 + TSS region transcription start site region 156390
Gm41846 19 40729437 to 40731663 2226 - lncRNA gene predicted gene, 41846
Tssr159218 19 40730296 to 40730305 9 - TSS region transcription start site region 159218
Tssr156391 19 40731063 to 40731069 6 + TSS region transcription start site region 156391
Tssr156392 19 40736802 to 40736825 23 + TSS region transcription start site region 156392
Tssr156393 19 40737266 to 40737281 15 + TSS region transcription start site region 156393
Tssr156394 19 40738886 to 40738921 35 + TSS region transcription start site region 156394
Tssr156395 19 40739398 to 40739421 23 + TSS region transcription start site region 156395
Tssr5509 19 40740944 to 40740945 1 - TSS region transcription start site region 5509
Cpgi10819 19 40748599 to 40748826 227 CpG island CpG island 10819
Tssr156396 19 40748795 to 40748826 31 + TSS region transcription start site region 156396
Tssr156397 19 40748848 to 40748857 9 + TSS region transcription start site region 156397
Cc2d2b 19 40754741 to 40829057 74316 + protein coding gene coiled-coil and C2 domain containing 2B
Tssr159219 19 40769535 to 40769557 22 - TSS region transcription start site region 159219
Gm33482 19 40816765 to 40818268 1503 - lncRNA gene predicted gene, 33482
Tssr159220 19 40821456 to 40821463 7 - TSS region transcription start site region 159220
Tssr159221 19 40821471 to 40821478 7 - TSS region transcription start site region 159221
Tssr159222 19 40821492 to 40821512 20 - TSS region transcription start site region 159222
Tssr156398 19 40829091 to 40829092 1 + TSS region transcription start site region 156398
Gm9099 19 40830521 to 40831854 1333 unclassified gene predicted gene 9099
Tssr156399 19 40830564 to 40830594 30 + TSS region transcription start site region 156399
Cpgi10820 19 40830668 to 40832325 1657 CpG island CpG island 10820
Tssr156400 19 40831248 to 40831292 44 + TSS region transcription start site region 156400
Ccnj 19 40831279 to 40848572 17293 + protein coding gene cyclin J
Tssr156401 19 40831296 to 40831313 17 + TSS region transcription start site region 156401
Tssr156402 19 40831964 to 40832018 54 + TSS region transcription start site region 156402
Tssr156403 19 40840721 to 40840758 37 + TSS region transcription start site region 156403
Tssr156404 19 40846560 to 40846563 3 + TSS region transcription start site region 156404
E030044B06Rik 19 40868386 to 40874071 5685 + lincRNA gene RIKEN cDNA E030044B06 gene
Cpgi10821 19 40873003 to 40873704 701 CpG island CpG island 10821