MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 19:40221844-40321865

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pdlim1	19	40222239 to 40271616	49377	-	protein coding gene	PDZ and LIM domain 1 (elfin)
Tssr159157	19	40231195 to 40231211	16	-	TSS region	transcription start site region 159157
Cpgi10812	19	40270394 to 40271948	1554		CpG island	CpG island 10812
Tssr159158	19	40271506 to 40271577	71	-	TSS region	transcription start site region 159158
Tssr159159	19	40271636 to 40271698	62	-	TSS region	transcription start site region 159159
Gm41845	19	40271701 to 40274454	2753	+	lncRNA gene	predicted gene, 41845
Tssr159160	19	40271772 to 40271794	22	-	TSS region	transcription start site region 159160
Tssr159161	19	40271813 to 40271822	9	-	TSS region	transcription start site region 159161
Tssr159162	19	40271844 to 40271865	21	-	TSS region	transcription start site region 159162
Tssr159163	19	40271874 to 40271888	14	-	TSS region	transcription start site region 159163
Tssr156369	19	40276039 to 40276056	17	+	TSS region	transcription start site region 156369
Cpgi10813	19	40276063 to 40276474	411		CpG island	CpG island 10813
Gm5693	19	40280951 to 40282794	1843	+	pseudogene	predicted gene 5693
Tssr159164	19	40293409 to 40293430	21	-	TSS region	transcription start site region 159164
Sorbs1	19	40294753 to 40513779	219026	-	protein coding gene	sorbin and SH3 domain containing 1
A930028N01Rik	19	40297971 to 40299555	1584	+	antisense lncRNA gene	RIKEN cDNA A930028N01 gene
Tssr159165	19	40299705 to 40299710	5	-	TSS region	transcription start site region 159165
Tssr159166	19	40305432 to 40305434	2	-	TSS region	transcription start site region 159166