Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:40219705-40379710

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pdlim1 19 40222239 to 40271616 49377 - protein coding gene PDZ and LIM domain 1 (elfin)
Tssr159157 19 40231195 to 40231211 16 - TSS region transcription start site region 159157
Cpgi10812 19 40270394 to 40271948 1554 CpG island CpG island 10812
Tssr159158 19 40271506 to 40271577 71 - TSS region transcription start site region 159158
Tssr159159 19 40271636 to 40271698 62 - TSS region transcription start site region 159159
Gm41845 19 40271701 to 40274454 2753 + lncRNA gene predicted gene, 41845
Tssr159160 19 40271772 to 40271794 22 - TSS region transcription start site region 159160
Tssr159161 19 40271813 to 40271822 9 - TSS region transcription start site region 159161
Tssr159162 19 40271844 to 40271865 21 - TSS region transcription start site region 159162
Tssr159163 19 40271874 to 40271888 14 - TSS region transcription start site region 159163
Tssr156369 19 40276039 to 40276056 17 + TSS region transcription start site region 156369
Cpgi10813 19 40276063 to 40276474 411 CpG island CpG island 10813
Gm5693 19 40280951 to 40282794 1843 + pseudogene predicted gene 5693
Tssr159164 19 40293409 to 40293430 21 - TSS region transcription start site region 159164
Sorbs1 19 40294753 to 40513779 219026 - protein coding gene sorbin and SH3 domain containing 1
A930028N01Rik 19 40297971 to 40299555 1584 + antisense lncRNA gene RIKEN cDNA A930028N01 gene
Tssr159165 19 40299705 to 40299710 5 - TSS region transcription start site region 159165
Tssr159166 19 40305432 to 40305434 2 - TSS region transcription start site region 159166
Cpgi10814 19 40325903 to 40326641 738 CpG island CpG island 10814
Tssr159167 19 40356616 to 40356654 38 - TSS region transcription start site region 159167
Tssr159168 19 40356659 to 40356690 31 - TSS region transcription start site region 159168
Tssr159169 19 40356692 to 40356717 25 - TSS region transcription start site region 159169
Tssr159170 19 40365043 to 40365060 17 - TSS region transcription start site region 159170
Tssr159171 19 40365163 to 40365193 30 - TSS region transcription start site region 159171
Tssr159172 19 40371448 to 40371454 6 - TSS region transcription start site region 159172
Tssr159173 19 40376681 to 40376703 22 - TSS region transcription start site region 159173
Tssr159174 19 40376739 to 40376750 11 - TSS region transcription start site region 159174
Tssr159175 19 40376770 to 40376781 11 - TSS region transcription start site region 159175
Tssr159176 19 40376818 to 40376823 5 - TSS region transcription start site region 159176
Tssr159177 19 40376915 to 40376935 20 - TSS region transcription start site region 159177
Tssr159178 19 40376941 to 40377022 81 - TSS region transcription start site region 159178
Tssr159179 19 40377051 to 40377064 13 - TSS region transcription start site region 159179
Tssr159180 19 40377749 to 40377761 12 - TSS region transcription start site region 159180
Tssr159181 19 40377767 to 40377838 71 - TSS region transcription start site region 159181