Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:39461667-40311695

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66 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cyp2c38 19 39389556 to 39463075 73519 - protein coding gene cytochrome P450, family 2, subfamily c, polypeptide 38
Tssr159139 19 39463067 to 39463081 14 - TSS region transcription start site region 159139
Tssr159140 19 39463089 to 39463108 19 - TSS region transcription start site region 159140
Tssr156355 19 39510820 to 39510823 3 + TSS region transcription start site region 156355
Tssr5502 19 39510826 to 39510833 7 + TSS region transcription start site region 5502
Tssr5503 19 39510839 to 39510840 1 + TSS region transcription start site region 5503
Tssr156356 19 39510844 to 39510855 11 + TSS region transcription start site region 156356
Cyp2c39 19 39510862 to 39568529 57667 + protein coding gene cytochrome P450, family 2, subfamily c, polypeptide 39
Tssr156357 19 39510877 to 39510890 13 + TSS region transcription start site region 156357
Tssr156358 19 39510907 to 39510918 11 + TSS region transcription start site region 156358
Tssr156359 19 39568053 to 39568056 3 + TSS region transcription start site region 156359
Cyp2c67 19 39608842 to 39649051 40209 - protein coding gene cytochrome P450, family 2, subfamily c, polypeptide 67
Tssr159141 19 39649046 to 39649061 15 - TSS region transcription start site region 159141
Cyp2c68 19 39688834 to 39741054 52220 - protein coding gene cytochrome P450, family 2, subfamily c, polypeptide 68
Tssr159142 19 39740999 to 39741028 29 - TSS region transcription start site region 159142
Tssr159143 19 39741093 to 39741114 21 - TSS region transcription start site region 159143
Cyp2c40 19 39767073 to 39812814 45741 - protein coding gene cytochrome P450, family 2, subfamily c, polypeptide 40
Cyp2c69 19 39842660 to 39886769 44109 - protein coding gene cytochrome P450, family 2, subfamily c, polypeptide 69
Tssr159144 19 39886667 to 39886695 28 - TSS region transcription start site region 159144
Tssr159145 19 39886730 to 39886760 30 - TSS region transcription start site region 159145
Cyp2c71-ps 19 39928044 to 39952861 24817 + pseudogene cytochrome P450, family 2, subfamily c, polypeptide 71, pseudogene
Cyp2c37 19 39992424 to 40012243 19819 + protein coding gene cytochrome P450, family 2. subfamily c, polypeptide 37
Cyp2c54 19 40037941 to 40073811 35870 - protein coding gene cytochrome P450, family 2, subfamily c, polypeptide 54
Tssr159146 19 40073731 to 40073770 39 - TSS region transcription start site region 159146
Tssr156360 19 40089626 to 40089636 10 + TSS region transcription start site region 156360
Tssr156361 19 40089640 to 40089656 16 + TSS region transcription start site region 156361
Cyp2c50 19 40089688 to 40113950 24262 + protein coding gene cytochrome P450, family 2, subfamily c, polypeptide 50
Tssr156362 19 40089699 to 40089723 24 + TSS region transcription start site region 156362
Tssr156363 19 40111276 to 40111312 36 + TSS region transcription start site region 156363
Tssr156364 19 40113434 to 40113477 43 + TSS region transcription start site region 156364
Tssr156365 19 40113664 to 40113676 12 + TSS region transcription start site region 156365
Tssr156366 19 40119747 to 40119765 18 + TSS region transcription start site region 156366
Tssr156367 19 40119786 to 40119821 35 + TSS region transcription start site region 156367
Cyp2c70 19 40153361 to 40187286 33925 - protein coding gene cytochrome P450, family 2, subfamily c, polypeptide 70
Tssr159147 19 40156837 to 40156865 28 - TSS region transcription start site region 159147
Tssr159148 19 40157896 to 40157935 39 - TSS region transcription start site region 159148
Tssr159149 19 40159468 to 40159472 4 - TSS region transcription start site region 159149
Tssr159150 19 40163114 to 40163118 4 - TSS region transcription start site region 159150
Tssr159151 19 40166977 to 40166981 4 - TSS region transcription start site region 159151
Tssr159152 19 40173672 to 40173682 10 - TSS region transcription start site region 159152
Tssr159153 19 40180393 to 40180405 12 - TSS region transcription start site region 159153
Tssr159154 19 40180456 to 40180474 18 - TSS region transcription start site region 159154
Tssr159155 19 40183560 to 40183577 17 - TSS region transcription start site region 159155
Tssr5504 19 40187201 to 40187213 12 - TSS region transcription start site region 5504
Tssr159156 19 40187277 to 40187294 17 - TSS region transcription start site region 159156
Gm5827 19 40189990 to 40194415 4425 + pseudogene predicted gene 5827
Tssr156368 19 40191022 to 40191032 10 + TSS region transcription start site region 156368
Gm16470 19 40212382 to 40213379 997 + pseudogene predicted pseudogene 16470
Pdlim1 19 40222239 to 40271616 49377 - protein coding gene PDZ and LIM domain 1 (elfin)
Tssr159157 19 40231195 to 40231211 16 - TSS region transcription start site region 159157
Cpgi10812 19 40270394 to 40271948 1554 CpG island CpG island 10812
Tssr159158 19 40271506 to 40271577 71 - TSS region transcription start site region 159158
Tssr159159 19 40271636 to 40271698 62 - TSS region transcription start site region 159159
Gm41845 19 40271701 to 40274454 2753 + lncRNA gene predicted gene, 41845
Tssr159160 19 40271772 to 40271794 22 - TSS region transcription start site region 159160
Tssr159161 19 40271813 to 40271822 9 - TSS region transcription start site region 159161
Tssr159162 19 40271844 to 40271865 21 - TSS region transcription start site region 159162
Tssr159163 19 40271874 to 40271888 14 - TSS region transcription start site region 159163
Tssr156369 19 40276039 to 40276056 17 + TSS region transcription start site region 156369
Cpgi10813 19 40276063 to 40276474 411 CpG island CpG island 10813
Gm5693 19 40280951 to 40282794 1843 + pseudogene predicted gene 5693
Tssr159164 19 40293409 to 40293430 21 - TSS region transcription start site region 159164
Sorbs1 19 40294753 to 40513779 219026 - protein coding gene sorbin and SH3 domain containing 1
A930028N01Rik 19 40297971 to 40299555 1584 + antisense lncRNA gene RIKEN cDNA A930028N01 gene
Tssr159165 19 40299705 to 40299710 5 - TSS region transcription start site region 159165
Tssr159166 19 40305432 to 40305434 2 - TSS region transcription start site region 159166