Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 19:3942230-4142242

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112 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Unc93b1 19 3935186 to 3949340 14154 + protein coding gene unc-93 homolog B1, TLR signaling regulator
Tssr154227 19 3942368 to 3942398 30 + TSS region transcription start site region 154227
Tssr157431 19 3942390 to 3942450 60 - TSS region transcription start site region 157431
Cpgi10378 19 3942714 to 3943667 953 CpG island CpG island 10378
Tssr154228 19 3943501 to 3943517 16 + TSS region transcription start site region 154228
Tssr154229 19 3943586 to 3943610 24 + TSS region transcription start site region 154229
Tssr154230 19 3944146 to 3944171 25 + TSS region transcription start site region 154230
Tssr154231 19 3947036 to 3947055 19 + TSS region transcription start site region 154231
Tssr154232 19 3947068 to 3947093 25 + TSS region transcription start site region 154232
Tssr154233 19 3948620 to 3948680 60 + TSS region transcription start site region 154233
Tssr154234 19 3948773 to 3948785 12 + TSS region transcription start site region 154234
Tssr154235 19 3948859 to 3948871 12 + TSS region transcription start site region 154235
Tssr154236 19 3949013 to 3949042 29 + TSS region transcription start site region 154236
Aldh3b3 19 3958645 to 3972103 13458 + protein coding gene aldehyde dehydrogenase 3 family, member B3
Tssr154237 19 3958803 to 3958832 29 + TSS region transcription start site region 154237
Tssr154238 19 3964330 to 3964344 14 + TSS region transcription start site region 154238
Tssr154239 19 3972322 to 3972345 23 + TSS region transcription start site region 154239
Aldh3b2 19 3972328 to 3981646 9318 + protein coding gene aldehyde dehydrogenase 3 family, member B2
Tssr154240 19 3972423 to 3972433 10 + TSS region transcription start site region 154240
Tssr154241 19 3972437 to 3972468 31 + TSS region transcription start site region 154241
Tssr154242 19 3972475 to 3972503 28 + TSS region transcription start site region 154242
Tssr154243 19 3972507 to 3972566 59 + TSS region transcription start site region 154243
Tssr154244 19 3979984 to 3980016 32 + TSS region transcription start site region 154244
Gm52386 19 3981654 to 3985761 4107 - lncRNA gene predicted gene, 52386
Tssr154245 19 3986564 to 3986579 15 + TSS region transcription start site region 154245
Acy3 19 3986570 to 3990007 3437 + protein coding gene aspartoacylase (aminoacylase) 3
Tssr154246 19 3988339 to 3988347 8 + TSS region transcription start site region 154246
Tbx10 19 3992752 to 3999512 6760 + protein coding gene T-box 10
4833408A19Rik 19 3999548 to 4000542 994 - lncRNA gene RIKEN cDNA 4833408A19 gene
Cpgi10379 19 3999883 to 4001239 1356 CpG island CpG island 10379
Tssr154247 19 4000395 to 4000430 35 + TSS region transcription start site region 154247
Nudt8 19 4000580 to 4002102 1522 + protein coding gene nudix (nucleoside diphosphate linked moiety X)-type motif 8
Tssr154248 19 4000582 to 4000659 77 + TSS region transcription start site region 154248
Gm49405 19 4000626 to 4005816 5190 + protein coding gene predicted gene, 49405
Gm16312 19 4000758 to 4001232 474 - lncRNA gene predicted gene 16312
Tssr154249 19 4003290 to 4003333 43 + TSS region transcription start site region 154249
Tssr154250 19 4003334 to 4003366 32 + TSS region transcription start site region 154250
Tssr154251 19 4003368 to 4003385 17 + TSS region transcription start site region 154251
Doc2g 19 4003385 to 4007005 3620 + protein coding gene double C2, gamma
Tssr154252 19 4003408 to 4003418 10 + TSS region transcription start site region 154252
Ndufv1 19 4007499 to 4012755 5256 - protein coding gene NADH:ubiquinone oxidoreductase core subunit V1
Cpgi10380 19 4012227 to 4013047 820 CpG island CpG island 10380
Tssr157432 19 4012656 to 4012736 80 - TSS region transcription start site region 157432
Tssr157433 19 4012738 to 4012749 11 - TSS region transcription start site region 157433
Gstp1 19 4035411 to 4037912 2501 - protein coding gene glutathione S-transferase, pi 1
Tssr157434 19 4036712 to 4036740 28 - TSS region transcription start site region 157434
Tssr157435 19 4036813 to 4036825 12 - TSS region transcription start site region 157435
Cpgi10381 19 4037759 to 4038096 337 CpG island CpG island 10381
Tssr5401 19 4037892 to 4037906 14 - TSS region transcription start site region 5401
Tssr157436 19 4037910 to 4037933 23 - TSS region transcription start site region 157436
Tssr157437 19 4037944 to 4037959 15 - TSS region transcription start site region 157437
Tssr5402 19 4038048 to 4038068 20 - TSS region transcription start site region 5402
Gstp2 19 4040288 to 4042221 1933 - protein coding gene glutathione S-transferase, pi 2
Tssr157438 19 4042230 to 4042242 12 - TSS region transcription start site region 157438
Tssr157439 19 4042243 to 4042273 30 - TSS region transcription start site region 157439
Tssr154253 19 4046472 to 4046481 9 + TSS region transcription start site region 154253
Tssr154254 19 4047063 to 4047070 7 + TSS region transcription start site region 154254
Gstp3 19 4057477 to 4059569 2092 - protein coding gene glutathione S-transferase pi 3
Tssr157440 19 4059037 to 4059061 24 - TSS region transcription start site region 157440
Tssr157441 19 4059077 to 4059099 22 - TSS region transcription start site region 157441
Tssr157442 19 4059449 to 4059476 27 - TSS region transcription start site region 157442
Tssr157443 19 4064095 to 4064099 4 - TSS region transcription start site region 157443
Tssr154255 19 4066410 to 4066425 15 + TSS region transcription start site region 154255
Gm42060 19 4067251 to 4071445 4194 - lncRNA gene predicted gene, 42060
Tssr157444 19 4069089 to 4069112 23 - TSS region transcription start site region 157444
Tssr157445 19 4069225 to 4069239 14 - TSS region transcription start site region 157445
Gm23927 19 4078298 to 4078512 214 - snoRNA gene predicted gene, 23927
Tssr154256 19 4081434 to 4081467 33 + TSS region transcription start site region 154256
Tssr154257 19 4081565 to 4081583 18 + TSS region transcription start site region 154257
Cabp2 19 4081578 to 4087340 5762 + protein coding gene calcium binding protein 2
Tssr154258 19 4082473 to 4082517 44 + TSS region transcription start site region 154258
Tssr154259 19 4082518 to 4082533 15 + TSS region transcription start site region 154259
Tssr154260 19 4082539 to 4082545 6 + TSS region transcription start site region 154260
Cpgi10382 19 4096535 to 4097960 1425 CpG island CpG island 10382
Tssr154261 19 4096880 to 4096945 65 + TSS region transcription start site region 154261
Cdk2ap2 19 4097182 to 4099019 1837 + protein coding gene CDK2-associated protein 2
Tssr154262 19 4097337 to 4097356 19 + TSS region transcription start site region 154262
Tssr154263 19 4097369 to 4097386 17 + TSS region transcription start site region 154263
Tssr154264 19 4097392 to 4097415 23 + TSS region transcription start site region 154264
Tssr154265 19 4097422 to 4097432 10 + TSS region transcription start site region 154265
Tssr154266 19 4097445 to 4097451 6 + TSS region transcription start site region 154266
Tssr154267 19 4097678 to 4097713 35 + TSS region transcription start site region 154267
Tssr154268 19 4097800 to 4097809 9 + TSS region transcription start site region 154268
Cpgi10383 19 4099913 to 4101492 1579 CpG island CpG island 10383
Pitpnm1 19 4099998 to 4113965 13967 + protein coding gene phosphatidylinositol transfer protein, membrane-associated 1
Tssr154269 19 4100000 to 4100083 83 + TSS region transcription start site region 154269
Tssr154270 19 4100936 to 4100987 51 + TSS region transcription start site region 154270
Tssr154271 19 4101005 to 4101008 3 + TSS region transcription start site region 154271
Tssr154272 19 4104421 to 4104423 2 + TSS region transcription start site region 154272
Tssr154273 19 4113389 to 4113408 19 + TSS region transcription start site region 154273
Aip 19 4114446 to 4125858 11412 - protein coding gene aryl-hydrocarbon receptor-interacting protein
Tssr157446 19 4118510 to 4118529 19 - TSS region transcription start site region 157446
Cpgi10384 19 4121112 to 4121689 577 CpG island CpG island 10384
Tssr157447 19 4121438 to 4121486 48 - TSS region transcription start site region 157447
Tssr157448 19 4121536 to 4121581 45 - TSS region transcription start site region 157448
Tssr157449 19 4124558 to 4124570 12 - TSS region transcription start site region 157449
Cpgi10385 19 4125668 to 4126521 853 CpG island CpG island 10385
Tssr157450 19 4125765 to 4125813 48 - TSS region transcription start site region 157450
Tssr157451 19 4125820 to 4125831 11 - TSS region transcription start site region 157451
Tssr157452 19 4125837 to 4125863 26 - TSS region transcription start site region 157452
Tssr157453 19 4125865 to 4125895 30 - TSS region transcription start site region 157453
Tssr154274 19 4125946 to 4125999 53 + TSS region transcription start site region 154274
Tmem134 19 4125960 to 4132307 6347 + protein coding gene transmembrane protein 134
Tssr154275 19 4126008 to 4126021 13 + TSS region transcription start site region 154275
Tssr154276 19 4126040 to 4126057 17 + TSS region transcription start site region 154276
Tssr157454 19 4127266 to 4127286 20 - TSS region transcription start site region 157454
Cabp4 19 4135423 to 4144033 8610 - protein coding gene calcium binding protein 4
Tssr157455 19 4139562 to 4139580 18 - TSS region transcription start site region 157455
Tssr157456 19 4139605 to 4139613 8 - TSS region transcription start site region 157456
Tssr157457 19 4139625 to 4139630 5 - TSS region transcription start site region 157457
Gpr152 19 4139799 to 4145741 5942 + protein coding gene G protein-coupled receptor 152
Tssr154277 19 4140290 to 4140321 31 + TSS region transcription start site region 154277