Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 19:3936570-4040007

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64 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Unc93b1 19 3935186 to 3949340 14154 + protein coding gene unc-93 homolog B1, TLR signaling regulator
Tssr154215 19 3936679 to 3936696 17 + TSS region transcription start site region 154215
Tssr154216 19 3937046 to 3937091 45 + TSS region transcription start site region 154216
Tssr154217 19 3938161 to 3938201 40 + TSS region transcription start site region 154217
Tssr154218 19 3941522 to 3941533 11 + TSS region transcription start site region 154218
Tssr154219 19 3941548 to 3941557 9 + TSS region transcription start site region 154219
Tssr154220 19 3941587 to 3941601 14 + TSS region transcription start site region 154220
Tssr154221 19 3941623 to 3941646 23 + TSS region transcription start site region 154221
Tssr154222 19 3941866 to 3941877 11 + TSS region transcription start site region 154222
Tssr154223 19 3941894 to 3941911 17 + TSS region transcription start site region 154223
Tssr154224 19 3941919 to 3941928 9 + TSS region transcription start site region 154224
Tssr154225 19 3941932 to 3941946 14 + TSS region transcription start site region 154225
Tssr154226 19 3941950 to 3941971 21 + TSS region transcription start site region 154226
Tssr154227 19 3942368 to 3942398 30 + TSS region transcription start site region 154227
Tssr157431 19 3942390 to 3942450 60 - TSS region transcription start site region 157431
Cpgi10378 19 3942714 to 3943667 953 CpG island CpG island 10378
Tssr154228 19 3943501 to 3943517 16 + TSS region transcription start site region 154228
Tssr154229 19 3943586 to 3943610 24 + TSS region transcription start site region 154229
Tssr154230 19 3944146 to 3944171 25 + TSS region transcription start site region 154230
Tssr154231 19 3947036 to 3947055 19 + TSS region transcription start site region 154231
Tssr154232 19 3947068 to 3947093 25 + TSS region transcription start site region 154232
Tssr154233 19 3948620 to 3948680 60 + TSS region transcription start site region 154233
Tssr154234 19 3948773 to 3948785 12 + TSS region transcription start site region 154234
Tssr154235 19 3948859 to 3948871 12 + TSS region transcription start site region 154235
Tssr154236 19 3949013 to 3949042 29 + TSS region transcription start site region 154236
Aldh3b3 19 3958645 to 3972103 13458 + protein coding gene aldehyde dehydrogenase 3 family, member B3
Tssr154237 19 3958803 to 3958832 29 + TSS region transcription start site region 154237
Tssr154238 19 3964330 to 3964344 14 + TSS region transcription start site region 154238
Tssr154239 19 3972322 to 3972345 23 + TSS region transcription start site region 154239
Aldh3b2 19 3972328 to 3981646 9318 + protein coding gene aldehyde dehydrogenase 3 family, member B2
Tssr154240 19 3972423 to 3972433 10 + TSS region transcription start site region 154240
Tssr154241 19 3972437 to 3972468 31 + TSS region transcription start site region 154241
Tssr154242 19 3972475 to 3972503 28 + TSS region transcription start site region 154242
Tssr154243 19 3972507 to 3972566 59 + TSS region transcription start site region 154243
Tssr154244 19 3979984 to 3980016 32 + TSS region transcription start site region 154244
Gm52386 19 3981654 to 3985761 4107 - lncRNA gene predicted gene, 52386
Tssr154245 19 3986564 to 3986579 15 + TSS region transcription start site region 154245
Acy3 19 3986570 to 3990007 3437 + protein coding gene aspartoacylase (aminoacylase) 3
Tssr154246 19 3988339 to 3988347 8 + TSS region transcription start site region 154246
Tbx10 19 3992752 to 3999512 6760 + protein coding gene T-box 10
4833408A19Rik 19 3999548 to 4000542 994 - lncRNA gene RIKEN cDNA 4833408A19 gene
Cpgi10379 19 3999883 to 4001239 1356 CpG island CpG island 10379
Tssr154247 19 4000395 to 4000430 35 + TSS region transcription start site region 154247
Nudt8 19 4000580 to 4002102 1522 + protein coding gene nudix (nucleoside diphosphate linked moiety X)-type motif 8
Tssr154248 19 4000582 to 4000659 77 + TSS region transcription start site region 154248
Gm49405 19 4000626 to 4005816 5190 + protein coding gene predicted gene, 49405
Gm16312 19 4000758 to 4001232 474 - lncRNA gene predicted gene 16312
Tssr154249 19 4003290 to 4003333 43 + TSS region transcription start site region 154249
Tssr154250 19 4003334 to 4003366 32 + TSS region transcription start site region 154250
Tssr154251 19 4003368 to 4003385 17 + TSS region transcription start site region 154251
Doc2g 19 4003385 to 4007005 3620 + protein coding gene double C2, gamma
Tssr154252 19 4003408 to 4003418 10 + TSS region transcription start site region 154252
Ndufv1 19 4007499 to 4012755 5256 - protein coding gene NADH:ubiquinone oxidoreductase core subunit V1
Cpgi10380 19 4012227 to 4013047 820 CpG island CpG island 10380
Tssr157432 19 4012656 to 4012736 80 - TSS region transcription start site region 157432
Tssr157433 19 4012738 to 4012749 11 - TSS region transcription start site region 157433
Gstp1 19 4035411 to 4037912 2501 - protein coding gene glutathione S-transferase, pi 1
Tssr157434 19 4036712 to 4036740 28 - TSS region transcription start site region 157434
Tssr157435 19 4036813 to 4036825 12 - TSS region transcription start site region 157435
Cpgi10381 19 4037759 to 4038096 337 CpG island CpG island 10381
Tssr5401 19 4037892 to 4037906 14 - TSS region transcription start site region 5401
Tssr157436 19 4037910 to 4037933 23 - TSS region transcription start site region 157436
Tssr157437 19 4037944 to 4037959 15 - TSS region transcription start site region 157437
Tssr5402 19 4038048 to 4038068 20 - TSS region transcription start site region 5402