Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:39350043-41380060

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319 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cyp2c72-ps 19 39347419 to 39360081 12662 + pseudogene cytochrome P450, family 2, subfamily c, polypeptide 72, pseudogene
Cyp2c38 19 39389556 to 39463075 73519 - protein coding gene cytochrome P450, family 2, subfamily c, polypeptide 38
Tssr159139 19 39463067 to 39463081 14 - TSS region transcription start site region 159139
Tssr159140 19 39463089 to 39463108 19 - TSS region transcription start site region 159140
Tssr156355 19 39510820 to 39510823 3 + TSS region transcription start site region 156355
Tssr5502 19 39510826 to 39510833 7 + TSS region transcription start site region 5502
Tssr5503 19 39510839 to 39510840 1 + TSS region transcription start site region 5503
Tssr156356 19 39510844 to 39510855 11 + TSS region transcription start site region 156356
Cyp2c39 19 39510862 to 39568529 57667 + protein coding gene cytochrome P450, family 2, subfamily c, polypeptide 39
Tssr156357 19 39510877 to 39510890 13 + TSS region transcription start site region 156357
Tssr156358 19 39510907 to 39510918 11 + TSS region transcription start site region 156358
Tssr156359 19 39568053 to 39568056 3 + TSS region transcription start site region 156359
Cyp2c67 19 39608842 to 39649051 40209 - protein coding gene cytochrome P450, family 2, subfamily c, polypeptide 67
Tssr159141 19 39649046 to 39649061 15 - TSS region transcription start site region 159141
Cyp2c68 19 39688834 to 39741054 52220 - protein coding gene cytochrome P450, family 2, subfamily c, polypeptide 68
Tssr159142 19 39740999 to 39741028 29 - TSS region transcription start site region 159142
Tssr159143 19 39741093 to 39741114 21 - TSS region transcription start site region 159143
Cyp2c40 19 39767073 to 39812814 45741 - protein coding gene cytochrome P450, family 2, subfamily c, polypeptide 40
Cyp2c69 19 39842660 to 39886769 44109 - protein coding gene cytochrome P450, family 2, subfamily c, polypeptide 69
Tssr159144 19 39886667 to 39886695 28 - TSS region transcription start site region 159144
Tssr159145 19 39886730 to 39886760 30 - TSS region transcription start site region 159145
Cyp2c71-ps 19 39928044 to 39952861 24817 + pseudogene cytochrome P450, family 2, subfamily c, polypeptide 71, pseudogene
Cyp2c37 19 39992424 to 40012243 19819 + protein coding gene cytochrome P450, family 2. subfamily c, polypeptide 37
Cyp2c54 19 40037941 to 40073811 35870 - protein coding gene cytochrome P450, family 2, subfamily c, polypeptide 54
Tssr159146 19 40073731 to 40073770 39 - TSS region transcription start site region 159146
Tssr156360 19 40089626 to 40089636 10 + TSS region transcription start site region 156360
Tssr156361 19 40089640 to 40089656 16 + TSS region transcription start site region 156361
Cyp2c50 19 40089688 to 40113950 24262 + protein coding gene cytochrome P450, family 2, subfamily c, polypeptide 50
Tssr156362 19 40089699 to 40089723 24 + TSS region transcription start site region 156362
Tssr156363 19 40111276 to 40111312 36 + TSS region transcription start site region 156363
Tssr156364 19 40113434 to 40113477 43 + TSS region transcription start site region 156364
Tssr156365 19 40113664 to 40113676 12 + TSS region transcription start site region 156365
Tssr156366 19 40119747 to 40119765 18 + TSS region transcription start site region 156366
Tssr156367 19 40119786 to 40119821 35 + TSS region transcription start site region 156367
Cyp2c70 19 40153361 to 40187286 33925 - protein coding gene cytochrome P450, family 2, subfamily c, polypeptide 70
Tssr159147 19 40156837 to 40156865 28 - TSS region transcription start site region 159147
Tssr159148 19 40157896 to 40157935 39 - TSS region transcription start site region 159148
Tssr159149 19 40159468 to 40159472 4 - TSS region transcription start site region 159149
Tssr159150 19 40163114 to 40163118 4 - TSS region transcription start site region 159150
Tssr159151 19 40166977 to 40166981 4 - TSS region transcription start site region 159151
Tssr159152 19 40173672 to 40173682 10 - TSS region transcription start site region 159152
Tssr159153 19 40180393 to 40180405 12 - TSS region transcription start site region 159153
Tssr159154 19 40180456 to 40180474 18 - TSS region transcription start site region 159154
Tssr159155 19 40183560 to 40183577 17 - TSS region transcription start site region 159155
Tssr5504 19 40187201 to 40187213 12 - TSS region transcription start site region 5504
Tssr159156 19 40187277 to 40187294 17 - TSS region transcription start site region 159156
Gm5827 19 40189990 to 40194415 4425 + pseudogene predicted gene 5827
Tssr156368 19 40191022 to 40191032 10 + TSS region transcription start site region 156368
Gm16470 19 40212382 to 40213379 997 + pseudogene predicted pseudogene 16470
Pdlim1 19 40222239 to 40271616 49377 - protein coding gene PDZ and LIM domain 1 (elfin)
Tssr159157 19 40231195 to 40231211 16 - TSS region transcription start site region 159157
Cpgi10812 19 40270394 to 40271948 1554 CpG island CpG island 10812
Tssr159158 19 40271506 to 40271577 71 - TSS region transcription start site region 159158
Tssr159159 19 40271636 to 40271698 62 - TSS region transcription start site region 159159
Gm41845 19 40271701 to 40274454 2753 + lncRNA gene predicted gene, 41845
Tssr159160 19 40271772 to 40271794 22 - TSS region transcription start site region 159160
Tssr159161 19 40271813 to 40271822 9 - TSS region transcription start site region 159161
Tssr159162 19 40271844 to 40271865 21 - TSS region transcription start site region 159162
Tssr159163 19 40271874 to 40271888 14 - TSS region transcription start site region 159163
Tssr156369 19 40276039 to 40276056 17 + TSS region transcription start site region 156369
Cpgi10813 19 40276063 to 40276474 411 CpG island CpG island 10813
Gm5693 19 40280951 to 40282794 1843 + pseudogene predicted gene 5693
Tssr159164 19 40293409 to 40293430 21 - TSS region transcription start site region 159164
Sorbs1 19 40294753 to 40513779 219026 - protein coding gene sorbin and SH3 domain containing 1
A930028N01Rik 19 40297971 to 40299555 1584 + antisense lncRNA gene RIKEN cDNA A930028N01 gene
Tssr159165 19 40299705 to 40299710 5 - TSS region transcription start site region 159165
Tssr159166 19 40305432 to 40305434 2 - TSS region transcription start site region 159166
Cpgi10814 19 40325903 to 40326641 738 CpG island CpG island 10814
Tssr159167 19 40356616 to 40356654 38 - TSS region transcription start site region 159167
Tssr159168 19 40356659 to 40356690 31 - TSS region transcription start site region 159168
Tssr159169 19 40356692 to 40356717 25 - TSS region transcription start site region 159169
Tssr159170 19 40365043 to 40365060 17 - TSS region transcription start site region 159170
Tssr159171 19 40365163 to 40365193 30 - TSS region transcription start site region 159171
Tssr159172 19 40371448 to 40371454 6 - TSS region transcription start site region 159172
Tssr159173 19 40376681 to 40376703 22 - TSS region transcription start site region 159173
Tssr159174 19 40376739 to 40376750 11 - TSS region transcription start site region 159174
Tssr159175 19 40376770 to 40376781 11 - TSS region transcription start site region 159175
Tssr159176 19 40376818 to 40376823 5 - TSS region transcription start site region 159176
Tssr159177 19 40376915 to 40376935 20 - TSS region transcription start site region 159177
Tssr159178 19 40376941 to 40377022 81 - TSS region transcription start site region 159178
Tssr159179 19 40377051 to 40377064 13 - TSS region transcription start site region 159179
Tssr159180 19 40377749 to 40377761 12 - TSS region transcription start site region 159180
Tssr159181 19 40377767 to 40377838 71 - TSS region transcription start site region 159181
Tssr159182 19 40382572 to 40382600 28 - TSS region transcription start site region 159182
Tssr159183 19 40382798 to 40382815 17 - TSS region transcription start site region 159183
Tssr159184 19 40382858 to 40382873 15 - TSS region transcription start site region 159184
Tssr159185 19 40382890 to 40382893 3 - TSS region transcription start site region 159185
Tssr159186 19 40383137 to 40383146 9 - TSS region transcription start site region 159186
Cpgi10815 19 40395401 to 40395564 163 CpG island CpG island 10815
Tssr159187 19 40405767 to 40405798 31 - TSS region transcription start site region 159187
Tssr159188 19 40406813 to 40406827 14 - TSS region transcription start site region 159188
Tssr159189 19 40415293 to 40415314 21 - TSS region transcription start site region 159189
9530039L23Rik 19 40416248 to 40416869 621 unclassified gene RIKEN cDNA 9530039L23 gene
Tssr159190 19 40450184 to 40450204 20 - TSS region transcription start site region 159190
3010085J16Rik 19 40458212 to 40458964 752 protein coding gene RIKEN cDNA 3010085J16 gene
5730409N24Rik 19 40472754 to 40474429 1675 unclassified gene RIKEN cDNA 5730409N24 gene
9130009M17Rik 19 40474596 to 40476538 1942 unclassified gene RIKEN cDNA 9130009M17 gene
Tssr5505 19 40476535 to 40476570 35 - TSS region transcription start site region 5505
Tssr159191 19 40487541 to 40487566 25 - TSS region transcription start site region 159191
Tssr159192 19 40487568 to 40487591 23 - TSS region transcription start site region 159192
Tssr159193 19 40496998 to 40497005 7 - TSS region transcription start site region 159193
Tssr159194 19 40497013 to 40497024 11 - TSS region transcription start site region 159194
Tssr159195 19 40508997 to 40509014 17 - TSS region transcription start site region 159195
Tssr159196 19 40509046 to 40509059 13 - TSS region transcription start site region 159196
Tssr159197 19 40511820 to 40511823 3 - TSS region transcription start site region 159197
Tssr159198 19 40512081 to 40512086 5 - TSS region transcription start site region 159198
Cpgi10816 19 40512913 to 40514093 1180 CpG island CpG island 10816
Tssr159199 19 40513714 to 40513792 78 - TSS region transcription start site region 159199
Tssr159200 19 40513833 to 40513880 47 - TSS region transcription start site region 159200
D19Jpk1 19 40545423 to 40545582 159 DNA segment DNA segment, Chr 19, Japan, Kominami 1
Aldh18a1 19 40550257 to 40588463 38206 - protein coding gene aldehyde dehydrogenase 18 family, member A1
Gm15801 19 40560537 to 40561058 521 - pseudogene predicted gene 15801
Tssr159201 19 40561746 to 40561764 18 - TSS region transcription start site region 159201
Tssr159202 19 40564973 to 40564987 14 - TSS region transcription start site region 159202
Tssr159203 19 40564995 to 40565013 18 - TSS region transcription start site region 159203
Tssr159204 19 40565042 to 40565058 16 - TSS region transcription start site region 159204
Cpgi10817 19 40587826 to 40588678 852 CpG island CpG island 10817
Tssr159205 19 40588338 to 40588371 33 - TSS region transcription start site region 159205
Tssr159206 19 40588374 to 40588426 52 - TSS region transcription start site region 159206
Tssr159207 19 40588428 to 40588439 11 - TSS region transcription start site region 159207
Tssr159208 19 40588453 to 40588464 11 - TSS region transcription start site region 159208
Tssr159209 19 40588470 to 40588471 1 - TSS region transcription start site region 159209
Tssr159210 19 40588489 to 40588502 13 - TSS region transcription start site region 159210
Gm27042 19 40589435 to 40594862 5427 + lincRNA gene predicted gene, 27042
Tctn3 19 40596446 to 40612233 15787 - protein coding gene tectonic family member 3
Cpgi10818 19 40611631 to 40612520 889 CpG island CpG island 10818
Tssr159211 19 40612160 to 40612255 95 - TSS region transcription start site region 159211
Tssr156370 19 40612356 to 40612373 17 + TSS region transcription start site region 156370
Entpd1 19 40612366 to 40741602 129236 + protein coding gene ectonucleoside triphosphate diphosphohydrolase 1
Tssr156371 19 40612392 to 40612407 15 + TSS region transcription start site region 156371
Gm16027 19 40615886 to 40616643 757 + pseudogene predicted gene 16027
Gm8783 19 40622460 to 40622981 521 + pseudogene predicted pseudogene 8783
Tssr5506 19 40637775 to 40637784 9 - TSS region transcription start site region 5506
Tssr159212 19 40638729 to 40638738 9 - TSS region transcription start site region 159212
Tssr159213 19 40638766 to 40638775 9 - TSS region transcription start site region 159213
Tssr156372 19 40638851 to 40638854 3 + TSS region transcription start site region 156372
Tssr156373 19 40640055 to 40640058 3 + TSS region transcription start site region 156373
Gm33305 19 40658272 to 40661201 2929 - lncRNA gene predicted gene, 33305
Tssr156374 19 40659455 to 40659462 7 + TSS region transcription start site region 156374
Tssr156375 19 40659660 to 40659689 29 + TSS region transcription start site region 156375
Tssr156376 19 40659785 to 40659802 17 + TSS region transcription start site region 156376
Tssr156377 19 40660142 to 40660170 28 + TSS region transcription start site region 156377
Tssr156378 19 40660171 to 40660182 11 + TSS region transcription start site region 156378
Tssr156379 19 40660484 to 40660498 14 + TSS region transcription start site region 156379
Tssr156380 19 40660651 to 40660664 13 + TSS region transcription start site region 156380
Tssr156381 19 40660675 to 40660694 19 + TSS region transcription start site region 156381
Tssr159214 19 40661246 to 40661261 15 - TSS region transcription start site region 159214
Tssr156382 19 40661288 to 40661304 16 + TSS region transcription start site region 156382
Tssr156383 19 40665213 to 40665225 12 + TSS region transcription start site region 156383
Tssr159215 19 40665919 to 40665931 12 - TSS region transcription start site region 159215
Tssr159216 19 40665941 to 40665950 9 - TSS region transcription start site region 159216
Tssr5507 19 40665961 to 40665966 5 - TSS region transcription start site region 5507
Tssr156384 19 40667232 to 40667243 11 + TSS region transcription start site region 156384
Tssr156385 19 40667607 to 40667612 5 + TSS region transcription start site region 156385
Tssr5508 19 40678780 to 40678816 36 + TSS region transcription start site region 5508
Tssr156386 19 40679319 to 40679339 20 + TSS region transcription start site region 156386
Tssr156387 19 40679568 to 40679583 15 + TSS region transcription start site region 156387
Tssr156388 19 40679599 to 40679617 18 + TSS region transcription start site region 156388
Tssr156389 19 40679678 to 40679685 7 + TSS region transcription start site region 156389
Tssr159217 19 40699781 to 40699786 5 - TSS region transcription start site region 159217
Tssr156390 19 40705913 to 40705926 13 + TSS region transcription start site region 156390
Gm41846 19 40729437 to 40731663 2226 - lncRNA gene predicted gene, 41846
Tssr159218 19 40730296 to 40730305 9 - TSS region transcription start site region 159218
Tssr156391 19 40731063 to 40731069 6 + TSS region transcription start site region 156391
Tssr156392 19 40736802 to 40736825 23 + TSS region transcription start site region 156392
Tssr156393 19 40737266 to 40737281 15 + TSS region transcription start site region 156393
Tssr156394 19 40738886 to 40738921 35 + TSS region transcription start site region 156394
Tssr156395 19 40739398 to 40739421 23 + TSS region transcription start site region 156395
Tssr5509 19 40740944 to 40740945 1 - TSS region transcription start site region 5509
Cpgi10819 19 40748599 to 40748826 227 CpG island CpG island 10819
Tssr156396 19 40748795 to 40748826 31 + TSS region transcription start site region 156396
Tssr156397 19 40748848 to 40748857 9 + TSS region transcription start site region 156397
Cc2d2b 19 40754741 to 40829057 74316 + protein coding gene coiled-coil and C2 domain containing 2B
Tssr159219 19 40769535 to 40769557 22 - TSS region transcription start site region 159219
Gm33482 19 40816765 to 40818268 1503 - lncRNA gene predicted gene, 33482
Tssr159220 19 40821456 to 40821463 7 - TSS region transcription start site region 159220
Tssr159221 19 40821471 to 40821478 7 - TSS region transcription start site region 159221
Tssr159222 19 40821492 to 40821512 20 - TSS region transcription start site region 159222
Tssr156398 19 40829091 to 40829092 1 + TSS region transcription start site region 156398
Gm9099 19 40830521 to 40831854 1333 unclassified gene predicted gene 9099
Tssr156399 19 40830564 to 40830594 30 + TSS region transcription start site region 156399
Cpgi10820 19 40830668 to 40832325 1657 CpG island CpG island 10820
Tssr156400 19 40831248 to 40831292 44 + TSS region transcription start site region 156400
Ccnj 19 40831279 to 40848572 17293 + protein coding gene cyclin J
Tssr156401 19 40831296 to 40831313 17 + TSS region transcription start site region 156401
Tssr156402 19 40831964 to 40832018 54 + TSS region transcription start site region 156402
Tssr156403 19 40840721 to 40840758 37 + TSS region transcription start site region 156403
Tssr156404 19 40846560 to 40846563 3 + TSS region transcription start site region 156404
E030044B06Rik 19 40868386 to 40874071 5685 + lincRNA gene RIKEN cDNA E030044B06 gene
Cpgi10821 19 40873003 to 40873704 701 CpG island CpG island 10821
Cpgi10822 19 40894070 to 40895574 1504 CpG island CpG island 10822
Tssr156405 19 40894152 to 40894163 11 + TSS region transcription start site region 156405
Tssr159223 19 40894603 to 40894641 38 - TSS region transcription start site region 159223
Tssr156406 19 40894692 to 40894736 44 + TSS region transcription start site region 156406
Mir8092 19 40894703 to 40894789 86 + miRNA gene microRNA 8092
Zfp518a 19 40894705 to 40917947 23242 + protein coding gene zinc finger protein 518A
Tssr156407 19 40908665 to 40908673 8 + TSS region transcription start site region 156407
Blnk 19 40928927 to 40994535 65608 - protein coding gene B cell linker
D19Mit121 19 40938133 to 40938256 123 DNA segment DNA Segment, Chr 19 Massachusetts Institute of Technology 121
Tssr156408 19 40940213 to 40940230 17 + TSS region transcription start site region 156408