Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:3878656-3928673

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Chka 19 3851773 to 3894369 42596 + protein coding gene choline kinase alpha
Tssr154201 19 3896049 to 3896056 7 + TSS region transcription start site region 154201
Tcirg1 19 3896050 to 3907133 11083 - protein coding gene T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3
Tssr157404 19 3897100 to 3897112 12 - TSS region transcription start site region 157404
Tssr157405 19 3897518 to 3897583 65 - TSS region transcription start site region 157405
Tssr157406 19 3898848 to 3898854 6 - TSS region transcription start site region 157406
Tssr157407 19 3899046 to 3899069 23 - TSS region transcription start site region 157407
Tssr157408 19 3900555 to 3900597 42 - TSS region transcription start site region 157408
Tssr157409 19 3900856 to 3900867 11 - TSS region transcription start site region 157409
Tssr157410 19 3902077 to 3902097 20 - TSS region transcription start site region 157410
Tssr157411 19 3903656 to 3903673 17 - TSS region transcription start site region 157411
Cpgi10374 19 3904082 to 3904387 305 CpG island CpG island 10374
Tssr157412 19 3904709 to 3904723 14 - TSS region transcription start site region 157412
Tssr157413 19 3905177 to 3905196 19 - TSS region transcription start site region 157413
Tssr157414 19 3905235 to 3905261 26 - TSS region transcription start site region 157414
Tssr157415 19 3905269 to 3905292 23 - TSS region transcription start site region 157415
Tssr157416 19 3907047 to 3907064 17 - TSS region transcription start site region 157416
Tssr157417 19 3907087 to 3907117 30 - TSS region transcription start site region 157417
Cpgi10375 19 3907184 to 3907352 168 CpG island CpG island 10375
Tssr154202 19 3907259 to 3907273 14 + TSS region transcription start site region 154202
Tssr154203 19 3907448 to 3907459 11 + TSS region transcription start site region 154203
Tssr157418 19 3907963 to 3907984 21 - TSS region transcription start site region 157418
Ndufs8 19 3908870 to 3912717 3847 - protein coding gene NADH:ubiquinone oxidoreductase core subunit S8
Tssr157419 19 3911753 to 3911759 6 - TSS region transcription start site region 157419
Tssr157420 19 3911770 to 3911790 20 - TSS region transcription start site region 157420
Tssr157421 19 3911801 to 3911846 45 - TSS region transcription start site region 157421
Cpgi10376 19 3912340 to 3913151 811 CpG island CpG island 10376
Tssr157422 19 3912711 to 3912722 11 - TSS region transcription start site region 157422
Tssr157423 19 3912733 to 3912779 46 - TSS region transcription start site region 157423
Tssr154204 19 3913041 to 3913059 18 + TSS region transcription start site region 154204
Aldh3b1 19 3913493 to 3929761 16268 - protein coding gene aldehyde dehydrogenase 3 family, member B1
Tssr157424 19 3914685 to 3914718 33 - TSS region transcription start site region 157424
Tssr157425 19 3918677 to 3918711 34 - TSS region transcription start site region 157425
Gm42059 19 3919391 to 3920826 1435 + lncRNA gene predicted gene, 42059
Gm29846 19 3923864 to 3924975 1111 + lncRNA gene predicted gene, 29846