Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:38776579-38979923

28 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Prdt5	19	36039544 to 38910568	2871024		QTL	prion disease incubation time 5
Plce1	19	38481109 to 38785030	303921	+	protein coding gene	phospholipase C, epsilon 1
Noc3l	19	38788128 to 38819237	31109	-	protein coding gene	NOC3 like DNA replication regulator
Tssr159135	19	38789102 to 38789110	8	-	TSS region	transcription start site region 159135
Tssr159136	19	38809967 to 38809972	5	-	TSS region	transcription start site region 159136
Cpgi10808	19	38818848 to 38819493	645		CpG island	CpG island 10808
Tssr159137	19	38819156 to 38819242	86	-	TSS region	transcription start site region 159137
Cpgi10809	19	38836158 to 38837669	1511		CpG island	CpG island 10809
Tssr156268	19	38836561 to 38836612	51	+	TSS region	transcription start site region 156268
Tbc1d12	19	38836579 to 38919923	83344	+	protein coding gene	TBC1D12: TBC1 domain family, member 12
Tssr156269	19	38836677 to 38836692	15	+	TSS region	transcription start site region 156269
Tssr156270	19	38836699 to 38836707	8	+	TSS region	transcription start site region 156270
D19Wsu44e	19	38868849 to 38869010	161		DNA segment	DNA segment, Chr 19, Wayne State University 44, expressed
Gm25838	19	38885242 to 38885361	119	+	unclassified non-coding RNA gene	predicted gene, 25838
D19Mit65	19	38910391 to 38910568	177		DNA segment	DNA segment, Chr 19, Massachusetts Institute of Technology 65
Cpgi10810	19	38930522 to 38931552	1030		CpG island	CpG island 10810
Tssr156271	19	38930909 to 38930920	11	+	TSS region	transcription start site region 156271
Tssr156272	19	38930928 to 38930941	13	+	TSS region	transcription start site region 156272
Tssr156273	19	38930948 to 38930968	20	+	TSS region	transcription start site region 156273
Tssr156274	19	38930987 to 38931004	17	+	TSS region	transcription start site region 156274
Hells	19	38930990 to 38970470	39480	+	protein coding gene	helicase, lymphoid specific
Tssr156275	19	38931008 to 38931029	21	+	TSS region	transcription start site region 156275
Tssr156276	19	38931034 to 38931039	5	+	TSS region	transcription start site region 156276
Tssr156277	19	38931388 to 38931400	12	+	TSS region	transcription start site region 156277
Tssr156278	19	38950255 to 38950280	25	+	TSS region	transcription start site region 156278
Tssr156279	19	38953577 to 38953605	28	+	TSS region	transcription start site region 156279
Cyp2c52-ps	19	38976647 to 39003289	26642	+	pseudogene	cytochrome P450, family 2, subfamily c, polypeptide 52, pseudogene
Cpgi10811	19	38979168 to 38979385	217		CpG island	CpG island 10811