Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:38623848-39014493

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prdt5 19 36039544 to 38910568 2871024 QTL prion disease incubation time 5
Plce1 19 38481109 to 38785030 303921 + protein coding gene phospholipase C, epsilon 1
Gm8717 19 38703444 to 38704438 994 - pseudogene predicted gene 8717
Tssr156267 19 38734943 to 38734947 4 + TSS region transcription start site region 156267
Gm28991 19 38748760 to 38752645 3885 - antisense lncRNA gene predicted gene 28991
Noc3l 19 38788128 to 38819237 31109 - protein coding gene NOC3 like DNA replication regulator
Tssr159135 19 38789102 to 38789110 8 - TSS region transcription start site region 159135
Tssr159136 19 38809967 to 38809972 5 - TSS region transcription start site region 159136
Cpgi10808 19 38818848 to 38819493 645 CpG island CpG island 10808
Tssr159137 19 38819156 to 38819242 86 - TSS region transcription start site region 159137
Cpgi10809 19 38836158 to 38837669 1511 CpG island CpG island 10809
Tssr156268 19 38836561 to 38836612 51 + TSS region transcription start site region 156268
Tbc1d12 19 38836579 to 38919923 83344 + protein coding gene TBC1D12: TBC1 domain family, member 12
Tssr156269 19 38836677 to 38836692 15 + TSS region transcription start site region 156269
Tssr156270 19 38836699 to 38836707 8 + TSS region transcription start site region 156270
D19Wsu44e 19 38868849 to 38869010 161 DNA segment DNA segment, Chr 19, Wayne State University 44, expressed
Gm25838 19 38885242 to 38885361 119 + unclassified non-coding RNA gene predicted gene, 25838
D19Mit65 19 38910391 to 38910568 177 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 65
Cpgi10810 19 38930522 to 38931552 1030 CpG island CpG island 10810
Tssr156271 19 38930909 to 38930920 11 + TSS region transcription start site region 156271
Tssr156272 19 38930928 to 38930941 13 + TSS region transcription start site region 156272
Tssr156273 19 38930948 to 38930968 20 + TSS region transcription start site region 156273
Tssr156274 19 38930987 to 38931004 17 + TSS region transcription start site region 156274
Hells 19 38930990 to 38970470 39480 + protein coding gene helicase, lymphoid specific
Tssr156275 19 38931008 to 38931029 21 + TSS region transcription start site region 156275
Tssr156276 19 38931034 to 38931039 5 + TSS region transcription start site region 156276
Tssr156277 19 38931388 to 38931400 12 + TSS region transcription start site region 156277
Tssr156278 19 38950255 to 38950280 25 + TSS region transcription start site region 156278
Tssr156279 19 38953577 to 38953605 28 + TSS region transcription start site region 156279
Cyp2c52-ps 19 38976647 to 39003289 26642 + pseudogene cytochrome P450, family 2, subfamily c, polypeptide 52, pseudogene
Cpgi10811 19 38979168 to 38979385 217 CpG island CpG island 10811
Tssr156280 19 39006914 to 39006923 9 + TSS region transcription start site region 156280
Tssr156281 19 39006948 to 39006972 24 + TSS region transcription start site region 156281
Cyp2c55 19 39007019 to 39042693 35674 + protein coding gene cytochrome P450, family 2, subfamily c, polypeptide 55
Gm23800 19 39007026 to 39007089 63 - miRNA gene predicted gene, 23800
Tssr156282 19 39007051 to 39007093 42 + TSS region transcription start site region 156282
Tssr156283 19 39007137 to 39007148 11 + TSS region transcription start site region 156283
Tssr156284 19 39007162 to 39007165 3 + TSS region transcription start site region 156284
Tssr156285 19 39011138 to 39011144 6 + TSS region transcription start site region 156285
Tssr156286 19 39011689 to 39011694 5 + TSS region transcription start site region 156286
Tssr156287 19 39011722 to 39011727 5 + TSS region transcription start site region 156287
Tssr156288 19 39011761 to 39011804 43 + TSS region transcription start site region 156288