Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:38295800-38495817

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lgi1 19 38264782 to 38308939 44157 + protein coding gene leucine-rich repeat LGI family, member 1
Gm42723 19 38300083 to 38315270 15187 - antisense lncRNA gene predicted gene 42723
Gm9886 19 38311058 to 38327048 15990 - lncRNA gene predicted gene 9886
Tssr159132 19 38342646 to 38342654 8 - TSS region transcription start site region 159132
Gm32960 19 38348636 to 38350079 1443 + lncRNA gene predicted gene, 32960
Tssr156256 19 38348694 to 38348722 28 + TSS region transcription start site region 156256
Tssr156257 19 38348731 to 38348743 12 + TSS region transcription start site region 156257
Gm33036 19 38352239 to 38358506 6267 - lncRNA gene predicted gene, 33036
Tssr159133 19 38358476 to 38358480 4 - TSS region transcription start site region 159133
Tssr159134 19 38372506 to 38372520 14 - TSS region transcription start site region 159134
Gm41844 19 38379292 to 38381215 1923 + protein coding gene predicted gene, 41844
Gm18936 19 38387580 to 38388161 581 - pseudogene predicted gene, 18936
D19Mit20 19 38390257 to 38390480 223 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 20
Pbwg20 19 38390257 to 38390480 223 QTL postnatal body weight growth 20
Cpgi10805 19 38395665 to 38396779 1114 CpG island CpG island 10805
Tssr156258 19 38395767 to 38395796 29 + TSS region transcription start site region 156258
Tssr156259 19 38395800 to 38395817 17 + TSS region transcription start site region 156259
Slc35g1 19 38395980 to 38405607 9627 + protein coding gene solute carrier family 35, member G1
Tssr156260 19 38396020 to 38396022 2 + TSS region transcription start site region 156260
Tssr156261 19 38396025 to 38396083 58 + TSS region transcription start site region 156261
Tssr156262 19 38458539 to 38458585 46 + TSS region transcription start site region 156262
Gm46666 19 38458585 to 38463554 4969 + lncRNA gene predicted gene, 46666
D19Mit118 19 38468071 to 38468176 105 DNA segment DNA Segment, Chr 19 Massachusetts Institute of Technology 118
Gm24930 19 38473120 to 38473202 82 - unclassified non-coding RNA gene predicted gene, 24930
Cpgi10806 19 38480486 to 38481656 1170 CpG island CpG island 10806
Tssr156263 19 38480998 to 38481013 15 + TSS region transcription start site region 156263
Tssr5497 19 38481014 to 38481033 19 + TSS region transcription start site region 5497
Tssr156264 19 38481057 to 38481120 63 + TSS region transcription start site region 156264
Plce1 19 38481109 to 38785030 303921 + protein coding gene phospholipase C, epsilon 1
Tssr156265 19 38481152 to 38481212 60 + TSS region transcription start site region 156265