Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:36981403-37816859

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112 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
dblr 19 26328315 to 37257062 10928747 heritable phenotypic marker doubleridge
Btaf1 19 36926079 to 37012752 86673 + protein coding gene B-TFIID TATA-box binding protein associated factor 1
Cpgi10787 19 37018326 to 37018794 468 CpG island CpG island 10787
Cpeb3 19 37021291 to 37208601 187310 - protein coding gene cytoplasmic polyadenylation element binding protein 3
Tssr159058 19 37023207 to 37023217 10 - TSS region transcription start site region 159058
Tssr159059 19 37077437 to 37077449 12 - TSS region transcription start site region 159059
Tssr159060 19 37077456 to 37077468 12 - TSS region transcription start site region 159060
Tssr159061 19 37077504 to 37077523 19 - TSS region transcription start site region 159061
D19Dcr26 19 37100019 to 37100114 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 26
Tssr159062 19 37127707 to 37127710 3 - TSS region transcription start site region 159062
Gm22714 19 37149085 to 37149162 77 - ribozyme gene predicted gene, 22714
A330032B11Rik 19 37173843 to 37196541 22698 + lincRNA gene RIKEN cDNA A330032B11 gene
Cpgi10788 19 37173913 to 37175101 1188 CpG island CpG island 10788
Tssr159063 19 37174921 to 37174935 14 - TSS region transcription start site region 159063
Tssr159064 19 37174990 to 37175009 19 - TSS region transcription start site region 159064
Tssr159065 19 37175024 to 37175049 25 - TSS region transcription start site region 159065
Tssr159066 19 37176025 to 37176034 9 - TSS region transcription start site region 159066
Tssr159067 19 37176037 to 37176054 17 - TSS region transcription start site region 159067
Tssr159068 19 37176055 to 37176078 23 - TSS region transcription start site region 159068
Tssr159069 19 37176082 to 37176098 16 - TSS region transcription start site region 159069
Tssr159070 19 37178011 to 37178048 37 - TSS region transcription start site region 159070
Gm23918 19 37179186 to 37179291 105 + rRNA gene predicted gene, 23918
Tssr159071 19 37194065 to 37194067 2 - TSS region transcription start site region 159071
Tssr159072 19 37205940 to 37205944 4 - TSS region transcription start site region 159072
Cpgi10789 19 37206623 to 37208091 1468 CpG island CpG island 10789
Tssr159073 19 37207436 to 37207498 62 - TSS region transcription start site region 159073
Tssr156208 19 37207528 to 37207587 59 + TSS region transcription start site region 156208
March5 19 37207543 to 37222139 14596 + protein coding gene membrane-associated ring finger (C3HC4) 5
Tssr159074 19 37207585 to 37207622 37 - TSS region transcription start site region 159074
Tssr156209 19 37207654 to 37207693 39 + TSS region transcription start site region 156209
Tssr156210 19 37207697 to 37207727 30 + TSS region transcription start site region 156210
Tssr159075 19 37208018 to 37208067 49 - TSS region transcription start site region 159075
Tssr159076 19 37210703 to 37210733 30 - TSS region transcription start site region 159076
Tssr156211 19 37212436 to 37212452 16 + TSS region transcription start site region 156211
Gm25268 19 37233382 to 37233484 102 - snRNA gene predicted gene, 25268
Cpgi10790 19 37233597 to 37234458 861 CpG island CpG island 10790
Gm9056 19 37233603 to 37234560 957 + pseudogene predicted gene 9056
D19Mit88 19 37256915 to 37257062 147 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 88
Moen2 19 37256915 to 37257062 147 QTL modifier of engrailed QTL 2
Mnp 19 37256915 to 37257062 147 QTL modifier of Niemann Pick type C1
4931408D14Rik 19 37258423 to 37264095 5672 - lncRNA gene RIKEN cDNA 4931408D14 gene
Tssr159077 19 37263860 to 37263871 11 - TSS region transcription start site region 159077
Tssr159078 19 37263921 to 37263928 7 - TSS region transcription start site region 159078
Tssr156212 19 37263958 to 37263981 23 + TSS region transcription start site region 156212
Tssr156213 19 37263987 to 37264007 20 + TSS region transcription start site region 156213
Tssr159079 19 37264060 to 37264113 53 - TSS region transcription start site region 159079
Ide 19 37268741 to 37334544 65803 - protein coding gene insulin degrading enzyme
Tssr159080 19 37291679 to 37291690 11 - TSS region transcription start site region 159080
Rpl10-ps6 19 37295155 to 37295796 641 - pseudogene ribosomal protein L10, pseudogene 6
Tssr159081 19 37295838 to 37295845 7 - TSS region transcription start site region 159081
Tssr159082 19 37315142 to 37315145 3 - TSS region transcription start site region 159082
Tssr159083 19 37317552 to 37317568 16 - TSS region transcription start site region 159083
Tssr159084 19 37337845 to 37337853 8 - TSS region transcription start site region 159084
Tssr159085 19 37353620 to 37353654 34 - TSS region transcription start site region 159085
D19Mit82 19 37373260 to 37373386 126 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 82
Cpgi10791 19 37375851 to 37376806 955 CpG island CpG island 10791
Tssr159086 19 37376229 to 37376242 13 - TSS region transcription start site region 159086
Tssr156214 19 37376359 to 37376422 63 + TSS region transcription start site region 156214
Kif11 19 37376403 to 37421859 45456 + protein coding gene kinesin family member 11
Tssr156215 19 37377620 to 37377622 2 + TSS region transcription start site region 156215
Tssr156216 19 37388127 to 37388132 5 + TSS region transcription start site region 156216
Gm8663 19 37388339 to 37389495 1156 + pseudogene predicted gene 8663
Tssr156217 19 37408725 to 37408741 16 + TSS region transcription start site region 156217
Gm46649 19 37413424 to 37413878 454 - pseudogene predicted gene, 46649
Tssr159087 19 37413875 to 37413886 11 - TSS region transcription start site region 159087
Gm38345 19 37432909 to 37434656 1747 - unclassified gene predicted gene, 38345
Cpgi10792 19 37433967 to 37435739 1772 CpG island CpG island 10792
Tssr5494 19 37434750 to 37434824 74 + TSS region transcription start site region 5494
Tssr156218 19 37434834 to 37434847 13 + TSS region transcription start site region 156218
Hhex 19 37434841 to 37440731 5890 + protein coding gene hematopoietically expressed homeobox
Tssr156219 19 37436621 to 37436625 4 + TSS region transcription start site region 156219
Tssr156220 19 37436707 to 37436716 9 + TSS region transcription start site region 156220
Tssr156221 19 37436732 to 37436748 16 + TSS region transcription start site region 156221
Tssr156222 19 37439772 to 37439789 17 + TSS region transcription start site region 156222
Gm23026 19 37463746 to 37463851 105 + snRNA gene predicted gene, 23026
Tssr156223 19 37465248 to 37465265 17 + TSS region transcription start site region 156223
1700122C19Rik 19 37465254 to 37471827 6573 + lncRNA gene RIKEN cDNA 1700122C19 gene
4933421H12Rik 19 37465260 to 37466955 1695 unclassified gene RIKEN cDNA 4933421H12 gene
Gm32294 19 37493599 to 37495964 2365 + lncRNA gene predicted gene, 32294
Tssr156224 19 37495515 to 37495519 4 + TSS region transcription start site region 156224
D19Dcr27 19 37502475 to 37502570 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 27
Tssr156225 19 37536609 to 37536635 26 + TSS region transcription start site region 156225
Tssr156226 19 37536636 to 37536657 21 + TSS region transcription start site region 156226
Tssr156227 19 37536797 to 37536822 25 + TSS region transcription start site region 156227
Tssr156228 19 37536995 to 37536998 3 + TSS region transcription start site region 156228
Gm41842 19 37545104 to 37546314 1210 - lncRNA gene predicted gene, 41842
Tssr156229 19 37547373 to 37547394 21 + TSS region transcription start site region 156229
Cpgi10793 19 37550035 to 37551135 1100 CpG island CpG island 10793
Tssr156230 19 37550397 to 37550468 71 + TSS region transcription start site region 156230
Exoc6 19 37550418 to 37683245 132827 + protein coding gene exocyst complex component 6
Tssr156231 19 37556718 to 37556719 1 + TSS region transcription start site region 156231
Tssr5495 19 37561573 to 37561579 6 - TSS region transcription start site region 5495
Tssr156232 19 37576970 to 37577002 32 + TSS region transcription start site region 156232
Tssr156233 19 37602537 to 37602541 4 + TSS region transcription start site region 156233
D19Dcr28 19 37631720 to 37631817 97 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 28
D19Mit101 19 37659224 to 37659346 122 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 101
Gm32342 19 37677387 to 37697564 20177 - lncRNA gene predicted gene, 32342
Cyp26c1 19 37685581 to 37693398 7817 + protein coding gene cytochrome P450, family 26, subfamily c, polypeptide 1
Cpgi10794 19 37686365 to 37687841 1476 CpG island CpG island 10794
Cpgi10795 19 37690776 to 37691147 371 CpG island CpG island 10795
Cpgi10796 19 37692840 to 37693515 675 CpG island CpG island 10796
Tssr159088 19 37693078 to 37693121 43 - TSS region transcription start site region 159088
Cpgi10797 19 37697202 to 37699508 2306 CpG island CpG island 10797
Tssr159089 19 37697612 to 37697630 18 - TSS region transcription start site region 159089
Tssr159090 19 37697673 to 37697694 21 - TSS region transcription start site region 159090
Tssr159091 19 37697698 to 37697714 16 - TSS region transcription start site region 159091
Tssr156234 19 37697792 to 37697805 13 + TSS region transcription start site region 156234
Cyp26a1 19 37697808 to 37701528 3720 + protein coding gene cytochrome P450, family 26, subfamily a, polypeptide 1
Tssr156235 19 37697863 to 37697870 7 + TSS region transcription start site region 156235
Gm9066 19 37722761 to 37723516 755 - pseudogene predicted gene 9066
Tssr156236 19 37784209 to 37784259 50 + TSS region transcription start site region 156236
Gm9067 19 37784259 to 37785765 1506 + pseudogene predicted gene 9067