Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:36981082-37371098

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
dblr 19 26328315 to 37257062 10928747 heritable phenotypic marker doubleridge
Btaf1 19 36926079 to 37012752 86673 + protein coding gene B-TFIID TATA-box binding protein associated factor 1
Cpgi10787 19 37018326 to 37018794 468 CpG island CpG island 10787
Cpeb3 19 37021291 to 37208601 187310 - protein coding gene cytoplasmic polyadenylation element binding protein 3
Tssr159058 19 37023207 to 37023217 10 - TSS region transcription start site region 159058
Tssr159059 19 37077437 to 37077449 12 - TSS region transcription start site region 159059
Tssr159060 19 37077456 to 37077468 12 - TSS region transcription start site region 159060
Tssr159061 19 37077504 to 37077523 19 - TSS region transcription start site region 159061
D19Dcr26 19 37100019 to 37100114 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 26
Tssr159062 19 37127707 to 37127710 3 - TSS region transcription start site region 159062
Gm22714 19 37149085 to 37149162 77 - ribozyme gene predicted gene, 22714
A330032B11Rik 19 37173843 to 37196541 22698 + lincRNA gene RIKEN cDNA A330032B11 gene
Cpgi10788 19 37173913 to 37175101 1188 CpG island CpG island 10788
Tssr159063 19 37174921 to 37174935 14 - TSS region transcription start site region 159063
Tssr159064 19 37174990 to 37175009 19 - TSS region transcription start site region 159064
Tssr159065 19 37175024 to 37175049 25 - TSS region transcription start site region 159065
Tssr159066 19 37176025 to 37176034 9 - TSS region transcription start site region 159066
Tssr159067 19 37176037 to 37176054 17 - TSS region transcription start site region 159067
Tssr159068 19 37176055 to 37176078 23 - TSS region transcription start site region 159068
Tssr159069 19 37176082 to 37176098 16 - TSS region transcription start site region 159069
Tssr159070 19 37178011 to 37178048 37 - TSS region transcription start site region 159070
Gm23918 19 37179186 to 37179291 105 + rRNA gene predicted gene, 23918
Tssr159071 19 37194065 to 37194067 2 - TSS region transcription start site region 159071
Tssr159072 19 37205940 to 37205944 4 - TSS region transcription start site region 159072
Cpgi10789 19 37206623 to 37208091 1468 CpG island CpG island 10789
Tssr159073 19 37207436 to 37207498 62 - TSS region transcription start site region 159073
Tssr156208 19 37207528 to 37207587 59 + TSS region transcription start site region 156208
March5 19 37207543 to 37222139 14596 + protein coding gene membrane-associated ring finger (C3HC4) 5
Tssr159074 19 37207585 to 37207622 37 - TSS region transcription start site region 159074
Tssr156209 19 37207654 to 37207693 39 + TSS region transcription start site region 156209
Tssr156210 19 37207697 to 37207727 30 + TSS region transcription start site region 156210
Tssr159075 19 37208018 to 37208067 49 - TSS region transcription start site region 159075
Tssr159076 19 37210703 to 37210733 30 - TSS region transcription start site region 159076
Tssr156211 19 37212436 to 37212452 16 + TSS region transcription start site region 156211
Gm25268 19 37233382 to 37233484 102 - snRNA gene predicted gene, 25268
Cpgi10790 19 37233597 to 37234458 861 CpG island CpG island 10790
Gm9056 19 37233603 to 37234560 957 + pseudogene predicted gene 9056
Mnp 19 37256915 to 37257062 147 QTL modifier of Niemann Pick type C1
Moen2 19 37256915 to 37257062 147 QTL modifier of engrailed QTL 2
D19Mit88 19 37256915 to 37257062 147 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 88
4931408D14Rik 19 37258423 to 37264095 5672 - lncRNA gene RIKEN cDNA 4931408D14 gene
Tssr159077 19 37263860 to 37263871 11 - TSS region transcription start site region 159077
Tssr159078 19 37263921 to 37263928 7 - TSS region transcription start site region 159078
Tssr156212 19 37263958 to 37263981 23 + TSS region transcription start site region 156212
Tssr156213 19 37263987 to 37264007 20 + TSS region transcription start site region 156213
Tssr159079 19 37264060 to 37264113 53 - TSS region transcription start site region 159079
Ide 19 37268741 to 37334544 65803 - protein coding gene insulin degrading enzyme
Tssr159080 19 37291679 to 37291690 11 - TSS region transcription start site region 159080
Rpl10-ps6 19 37295155 to 37295796 641 - pseudogene ribosomal protein L10, pseudogene 6
Tssr159081 19 37295838 to 37295845 7 - TSS region transcription start site region 159081
Tssr159082 19 37315142 to 37315145 3 - TSS region transcription start site region 159082
Tssr159083 19 37317552 to 37317568 16 - TSS region transcription start site region 159083
Tssr159084 19 37337845 to 37337853 8 - TSS region transcription start site region 159084
Tssr159085 19 37353620 to 37353654 34 - TSS region transcription start site region 159085