Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:36354366-40695110

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559 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
dblr 19 26328315 to 37257062 10928747 heritable phenotypic marker doubleridge
Prdt5 19 36039544 to 38910568 2871024 QTL prion disease incubation time 5
Pcgf5 19 36348309 to 36460970 112661 + protein coding gene polycomb group ring finger 5
Gm47773 19 36361343 to 36361811 468 + pseudogene predicted gene, 47773
Gm23170 19 36384792 to 36384897 105 - snRNA gene predicted gene, 23170
Gm9042 19 36404447 to 36406110 1663 + pseudogene predicted gene 9042
Tssr156183 19 36404882 to 36404887 5 + TSS region transcription start site region 156183
Cpgi10778 19 36409251 to 36410447 1196 CpG island CpG island 10778
Tssr156184 19 36409630 to 36409662 32 + TSS region transcription start site region 156184
Tssr156185 19 36409669 to 36409691 22 + TSS region transcription start site region 156185
Tssr156186 19 36409719 to 36409757 38 + TSS region transcription start site region 156186
Tssr156187 19 36409762 to 36409771 9 + TSS region transcription start site region 156187
Tssr156188 19 36409833 to 36409856 23 + TSS region transcription start site region 156188
Tssr156189 19 36409911 to 36409920 9 + TSS region transcription start site region 156189
Tssr156190 19 36409967 to 36409978 11 + TSS region transcription start site region 156190
F530104D19Rik 19 36448992 to 36451157 2165 - antisense lncRNA gene RIKEN cDNA F530104D19 gene
Tssr156191 19 36464037 to 36464053 16 + TSS region transcription start site region 156191
Gm32143 19 36533923 to 36538802 4879 - lncRNA gene predicted gene, 32143
Gm41838 19 36552925 to 36553977 1052 - lncRNA gene predicted gene, 41838
Cpgi10779 19 36553839 to 36555475 1636 CpG island CpG island 10779
Hectd2 19 36554639 to 36621135 66496 + protein coding gene HECT domain E3 ubiquitin protein ligase 2
Tssr156192 19 36554661 to 36554688 27 + TSS region transcription start site region 156192
Tssr156193 19 36554690 to 36554714 24 + TSS region transcription start site region 156193
Tssr156194 19 36554719 to 36554731 12 + TSS region transcription start site region 156194
Tssr156195 19 36554742 to 36554773 31 + TSS region transcription start site region 156195
Tssr156196 19 36554774 to 36554793 19 + TSS region transcription start site region 156196
Hectd2os 19 36619418 to 36689479 70061 - lncRNA gene Hectd2, opposite strand
Tssr159045 19 36625998 to 36626035 37 - TSS region transcription start site region 159045
Tssr159046 19 36626045 to 36626061 16 - TSS region transcription start site region 159046
Tssr159047 19 36689269 to 36689306 37 - TSS region transcription start site region 159047
Tssr159048 19 36689319 to 36689368 49 - TSS region transcription start site region 159048
Ppp1r3c 19 36731731 to 36736604 4873 - protein coding gene protein phosphatase 1, regulatory subunit 3C
Cpgi10780 19 36736461 to 36737096 635 CpG island CpG island 10780
Tssr159049 19 36736656 to 36736670 14 - TSS region transcription start site region 159049
Tssr159050 19 36797084 to 36797094 10 - TSS region transcription start site region 159050
Cpgi10781 19 36815461 to 36815636 175 CpG island CpG island 10781
Cpgi10782 19 36818276 to 36818508 232 CpG island CpG island 10782
Tssr156197 19 36833178 to 36833195 17 + TSS region transcription start site region 156197
Cpgi10783 19 36833961 to 36834943 982 CpG island CpG island 10783
Tssr156198 19 36834196 to 36834208 12 + TSS region transcription start site region 156198
Tssr156199 19 36834215 to 36834297 82 + TSS region transcription start site region 156199
Tnks2 19 36834232 to 36893477 59245 + protein coding gene tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
Tssr156200 19 36834304 to 36834309 5 + TSS region transcription start site region 156200
Tssr156201 19 36879260 to 36879279 19 + TSS region transcription start site region 156201
Tssr156202 19 36890791 to 36890814 23 + TSS region transcription start site region 156202
Cpgi10784 19 36904073 to 36904750 677 CpG island CpG island 10784
Tssr156203 19 36917067 to 36917075 8 + TSS region transcription start site region 156203
Fgfbp3 19 36917550 to 36919599 2049 - protein coding gene fibroblast growth factor binding protein 3
Tssr159051 19 36918248 to 36918287 39 - TSS region transcription start site region 159051
Cpgi10785 19 36918377 to 36919410 1033 CpG island CpG island 10785
Tssr159052 19 36919052 to 36919064 12 - TSS region transcription start site region 159052
Tssr159053 19 36919077 to 36919134 57 - TSS region transcription start site region 159053
Tssr159054 19 36919606 to 36919622 16 - TSS region transcription start site region 159054
Tssr159055 19 36919631 to 36919646 15 - TSS region transcription start site region 159055
Tssr159056 19 36919652 to 36919659 7 - TSS region transcription start site region 159056
Cpgi10786 19 36925609 to 36926678 1069 CpG island CpG island 10786
Tssr159057 19 36926027 to 36926056 29 - TSS region transcription start site region 159057
Tssr156204 19 36926071 to 36926177 106 + TSS region transcription start site region 156204
Btaf1 19 36926079 to 37012752 86673 + protein coding gene B-TFIID TATA-box binding protein associated factor 1
Tssr156205 19 36926669 to 36926674 5 + TSS region transcription start site region 156205
Tssr156206 19 36928005 to 36928013 8 + TSS region transcription start site region 156206
Tssr156207 19 36930029 to 36930032 3 + TSS region transcription start site region 156207
Cpgi10787 19 37018326 to 37018794 468 CpG island CpG island 10787
Cpeb3 19 37021291 to 37208601 187310 - protein coding gene cytoplasmic polyadenylation element binding protein 3
Tssr159058 19 37023207 to 37023217 10 - TSS region transcription start site region 159058
Tssr159059 19 37077437 to 37077449 12 - TSS region transcription start site region 159059
Tssr159060 19 37077456 to 37077468 12 - TSS region transcription start site region 159060
Tssr159061 19 37077504 to 37077523 19 - TSS region transcription start site region 159061
D19Dcr26 19 37100019 to 37100114 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 26
Tssr159062 19 37127707 to 37127710 3 - TSS region transcription start site region 159062
Gm22714 19 37149085 to 37149162 77 - ribozyme gene predicted gene, 22714
A330032B11Rik 19 37173843 to 37196541 22698 + lincRNA gene RIKEN cDNA A330032B11 gene
Cpgi10788 19 37173913 to 37175101 1188 CpG island CpG island 10788
Tssr159063 19 37174921 to 37174935 14 - TSS region transcription start site region 159063
Tssr159064 19 37174990 to 37175009 19 - TSS region transcription start site region 159064
Tssr159065 19 37175024 to 37175049 25 - TSS region transcription start site region 159065
Tssr159066 19 37176025 to 37176034 9 - TSS region transcription start site region 159066
Tssr159067 19 37176037 to 37176054 17 - TSS region transcription start site region 159067
Tssr159068 19 37176055 to 37176078 23 - TSS region transcription start site region 159068
Tssr159069 19 37176082 to 37176098 16 - TSS region transcription start site region 159069
Tssr159070 19 37178011 to 37178048 37 - TSS region transcription start site region 159070
Gm23918 19 37179186 to 37179291 105 + rRNA gene predicted gene, 23918
Tssr159071 19 37194065 to 37194067 2 - TSS region transcription start site region 159071
Tssr159072 19 37205940 to 37205944 4 - TSS region transcription start site region 159072
Cpgi10789 19 37206623 to 37208091 1468 CpG island CpG island 10789
Tssr159073 19 37207436 to 37207498 62 - TSS region transcription start site region 159073
Tssr156208 19 37207528 to 37207587 59 + TSS region transcription start site region 156208
March5 19 37207543 to 37222139 14596 + protein coding gene membrane-associated ring finger (C3HC4) 5
Tssr159074 19 37207585 to 37207622 37 - TSS region transcription start site region 159074
Tssr156209 19 37207654 to 37207693 39 + TSS region transcription start site region 156209
Tssr156210 19 37207697 to 37207727 30 + TSS region transcription start site region 156210
Tssr159075 19 37208018 to 37208067 49 - TSS region transcription start site region 159075
Tssr159076 19 37210703 to 37210733 30 - TSS region transcription start site region 159076
Tssr156211 19 37212436 to 37212452 16 + TSS region transcription start site region 156211
Gm25268 19 37233382 to 37233484 102 - snRNA gene predicted gene, 25268
Cpgi10790 19 37233597 to 37234458 861 CpG island CpG island 10790
Gm9056 19 37233603 to 37234560 957 + pseudogene predicted gene 9056
Moen2 19 37256915 to 37257062 147 QTL modifier of engrailed QTL 2
Mnp 19 37256915 to 37257062 147 QTL modifier of Niemann Pick type C1
D19Mit88 19 37256915 to 37257062 147 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 88
4931408D14Rik 19 37258423 to 37264095 5672 - lncRNA gene RIKEN cDNA 4931408D14 gene
Tssr159077 19 37263860 to 37263871 11 - TSS region transcription start site region 159077
Tssr159078 19 37263921 to 37263928 7 - TSS region transcription start site region 159078
Tssr156212 19 37263958 to 37263981 23 + TSS region transcription start site region 156212
Tssr156213 19 37263987 to 37264007 20 + TSS region transcription start site region 156213
Tssr159079 19 37264060 to 37264113 53 - TSS region transcription start site region 159079
Ide 19 37268741 to 37334544 65803 - protein coding gene insulin degrading enzyme
Tssr159080 19 37291679 to 37291690 11 - TSS region transcription start site region 159080
Rpl10-ps6 19 37295155 to 37295796 641 - pseudogene ribosomal protein L10, pseudogene 6
Tssr159081 19 37295838 to 37295845 7 - TSS region transcription start site region 159081
Tssr159082 19 37315142 to 37315145 3 - TSS region transcription start site region 159082
Tssr159083 19 37317552 to 37317568 16 - TSS region transcription start site region 159083
Tssr159084 19 37337845 to 37337853 8 - TSS region transcription start site region 159084
Tssr159085 19 37353620 to 37353654 34 - TSS region transcription start site region 159085
D19Mit82 19 37373260 to 37373386 126 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 82
Cpgi10791 19 37375851 to 37376806 955 CpG island CpG island 10791
Tssr159086 19 37376229 to 37376242 13 - TSS region transcription start site region 159086
Tssr156214 19 37376359 to 37376422 63 + TSS region transcription start site region 156214
Kif11 19 37376403 to 37421859 45456 + protein coding gene kinesin family member 11
Tssr156215 19 37377620 to 37377622 2 + TSS region transcription start site region 156215
Tssr156216 19 37388127 to 37388132 5 + TSS region transcription start site region 156216
Gm8663 19 37388339 to 37389495 1156 + pseudogene predicted gene 8663
Tssr156217 19 37408725 to 37408741 16 + TSS region transcription start site region 156217
Gm46649 19 37413424 to 37413878 454 - pseudogene predicted gene, 46649
Tssr159087 19 37413875 to 37413886 11 - TSS region transcription start site region 159087
Gm38345 19 37432909 to 37434656 1747 - unclassified gene predicted gene, 38345
Cpgi10792 19 37433967 to 37435739 1772 CpG island CpG island 10792
Tssr5494 19 37434750 to 37434824 74 + TSS region transcription start site region 5494
Tssr156218 19 37434834 to 37434847 13 + TSS region transcription start site region 156218
Hhex 19 37434841 to 37440731 5890 + protein coding gene hematopoietically expressed homeobox
Tssr156219 19 37436621 to 37436625 4 + TSS region transcription start site region 156219
Tssr156220 19 37436707 to 37436716 9 + TSS region transcription start site region 156220
Tssr156221 19 37436732 to 37436748 16 + TSS region transcription start site region 156221
Tssr156222 19 37439772 to 37439789 17 + TSS region transcription start site region 156222
Gm23026 19 37463746 to 37463851 105 + snRNA gene predicted gene, 23026
Tssr156223 19 37465248 to 37465265 17 + TSS region transcription start site region 156223
1700122C19Rik 19 37465254 to 37471827 6573 + lncRNA gene RIKEN cDNA 1700122C19 gene
4933421H12Rik 19 37465260 to 37466955 1695 unclassified gene RIKEN cDNA 4933421H12 gene
Gm32294 19 37493599 to 37495964 2365 + lncRNA gene predicted gene, 32294
Tssr156224 19 37495515 to 37495519 4 + TSS region transcription start site region 156224
D19Dcr27 19 37502475 to 37502570 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 27
Tssr156225 19 37536609 to 37536635 26 + TSS region transcription start site region 156225
Tssr156226 19 37536636 to 37536657 21 + TSS region transcription start site region 156226
Tssr156227 19 37536797 to 37536822 25 + TSS region transcription start site region 156227
Tssr156228 19 37536995 to 37536998 3 + TSS region transcription start site region 156228
Gm41842 19 37545104 to 37546314 1210 - lncRNA gene predicted gene, 41842
Tssr156229 19 37547373 to 37547394 21 + TSS region transcription start site region 156229
Cpgi10793 19 37550035 to 37551135 1100 CpG island CpG island 10793
Tssr156230 19 37550397 to 37550468 71 + TSS region transcription start site region 156230
Exoc6 19 37550418 to 37683245 132827 + protein coding gene exocyst complex component 6
Tssr156231 19 37556718 to 37556719 1 + TSS region transcription start site region 156231
Tssr5495 19 37561573 to 37561579 6 - TSS region transcription start site region 5495
Tssr156232 19 37576970 to 37577002 32 + TSS region transcription start site region 156232
Tssr156233 19 37602537 to 37602541 4 + TSS region transcription start site region 156233
D19Dcr28 19 37631720 to 37631817 97 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 28
D19Mit101 19 37659224 to 37659346 122 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 101
Gm32342 19 37677387 to 37697564 20177 - lncRNA gene predicted gene, 32342
Cyp26c1 19 37685581 to 37693398 7817 + protein coding gene cytochrome P450, family 26, subfamily c, polypeptide 1
Cpgi10794 19 37686365 to 37687841 1476 CpG island CpG island 10794
Cpgi10795 19 37690776 to 37691147 371 CpG island CpG island 10795
Cpgi10796 19 37692840 to 37693515 675 CpG island CpG island 10796
Tssr159088 19 37693078 to 37693121 43 - TSS region transcription start site region 159088
Cpgi10797 19 37697202 to 37699508 2306 CpG island CpG island 10797
Tssr159089 19 37697612 to 37697630 18 - TSS region transcription start site region 159089
Tssr159090 19 37697673 to 37697694 21 - TSS region transcription start site region 159090
Tssr159091 19 37697698 to 37697714 16 - TSS region transcription start site region 159091
Tssr156234 19 37697792 to 37697805 13 + TSS region transcription start site region 156234
Cyp26a1 19 37697808 to 37701528 3720 + protein coding gene cytochrome P450, family 26, subfamily a, polypeptide 1
Tssr156235 19 37697863 to 37697870 7 + TSS region transcription start site region 156235
Gm9066 19 37722761 to 37723516 755 - pseudogene predicted gene 9066
Tssr156236 19 37784209 to 37784259 50 + TSS region transcription start site region 156236
Gm9067 19 37784259 to 37785765 1506 + pseudogene predicted gene 9067
Cpgi10798 19 37826326 to 37826529 203 CpG island CpG island 10798
Gm4757 19 37870267 to 37872256 1989 + pseudogene predicted gene 4757
Myof 19 37899036 to 38043577 144541 - protein coding gene myoferlin
Tssr159092 19 37930976 to 37930990 14 - TSS region transcription start site region 159092
Tssr159093 19 37955910 to 37955941 31 - TSS region transcription start site region 159093
Tssr159094 19 37957401 to 37957425 24 - TSS region transcription start site region 159094
Tssr159095 19 37959759 to 37959777 18 - TSS region transcription start site region 159095
Tssr156237 19 37985609 to 37985612 3 + TSS region transcription start site region 156237
Tssr159096 19 37989534 to 37989545 11 - TSS region transcription start site region 159096
Tssr159097 19 37989696 to 37989727 31 - TSS region transcription start site region 159097
Tssr156238 19 38016461 to 38016494 33 + TSS region transcription start site region 156238
Tssr159098 19 38022614 to 38022627 13 - TSS region transcription start site region 159098
Tssr159099 19 38022734 to 38022752 18 - TSS region transcription start site region 159099
Tssr159100 19 38022764 to 38022777 13 - TSS region transcription start site region 159100
Tssr159101 19 38022792 to 38022813 21 - TSS region transcription start site region 159101
Tssr159102 19 38024330 to 38024346 16 - TSS region transcription start site region 159102
Tssr159103 19 38025817 to 38025830 13 - TSS region transcription start site region 159103
Tssr156239 19 38030241 to 38030250 9 + TSS region transcription start site region 156239
Tssr159104 19 38030647 to 38030651 4 - TSS region transcription start site region 159104
Tssr159105 19 38032912 to 38032918 6 - TSS region transcription start site region 159105
Tssr5496 19 38040688 to 38040719 31 - TSS region transcription start site region 5496
Tssr159106 19 38043324 to 38043384 60 - TSS region transcription start site region 159106
Tssr159107 19 38043385 to 38043418 33 - TSS region transcription start site region 159107
Tssr159108 19 38043559 to 38043600 41 - TSS region transcription start site region 159108
Tssr159109 19 38043635 to 38043646 11 - TSS region transcription start site region 159109
Tssr159110 19 38043760 to 38043801 41 - TSS region transcription start site region 159110
I830134H01Rik 19 38051774 to 38054528 2754 - lincRNA gene RIKEN cDNA I830134H01 gene
Cpgi10799 19 38054427 to 38055419 992 CpG island CpG island 10799