Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:35535241-36695252

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85 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm22853 19 35605674 to 35605804 130 - rRNA gene predicted gene, 22853
Gm41836 19 35705765 to 35760577 54812 - lncRNA gene predicted gene, 41836
Tssr159027 19 35748803 to 35748808 5 - TSS region transcription start site region 159027
Gm25611 19 35759933 to 35760065 132 - snoRNA gene predicted gene, 25611
Tssr5492 19 35783544 to 35783545 1 + TSS region transcription start site region 5492
D19Mit12 19 35810580 to 35810726 146 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 12
A830019P07Rik 19 35835221 to 35924578 89357 - lincRNA gene RIKEN cDNA A830019P07 gene
D19Mit133 19 35844193 to 35844305 112 DNA segment DNA Segment, Chr 19, Massachusetts Institute of Technology 133
Tssr159028 19 35858379 to 35858381 2 - TSS region transcription start site region 159028
Gm17926 19 35870079 to 35870772 693 + pseudogene predicted gene, 17926
Tssr159029 19 35924488 to 35924508 20 - TSS region transcription start site region 159029
Htr7 19 35958734 to 36057507 98773 - protein coding gene 5-hydroxytryptamine (serotonin) receptor 7
Cpgi10773 19 35969595 to 35969927 332 CpG island CpG island 10773
Tssr156170 19 35975048 to 35975049 1 + TSS region transcription start site region 156170
Sluc1 19 36039544 to 46773082 10733538 QTL susceptibility to lung cancer 1
D19Mit63 19 36039544 to 36039693 149 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 63
Prdt5 19 36039544 to 38910568 2871024 QTL prion disease incubation time 5
Cpgi10774 19 36056542 to 36057888 1346 CpG island CpG island 10774
Cpgi10775 19 36083640 to 36083908 268 CpG island CpG island 10775
Tssr156171 19 36083696 to 36083736 40 + TSS region transcription start site region 156171
Rpp30 19 36083716 to 36104772 21056 + protein coding gene ribonuclease P/MRP 30 subunit
Tssr156172 19 36083746 to 36083756 10 + TSS region transcription start site region 156172
Cpgi10776 19 36109353 to 36109613 260 CpG island CpG island 10776
Ankrd1 19 36111965 to 36119844 7879 - protein coding gene ankyrin repeat domain 1 (cardiac muscle)
Tssr159030 19 36112056 to 36112095 39 - TSS region transcription start site region 159030
Tssr159031 19 36112317 to 36112323 6 - TSS region transcription start site region 159031
Tssr159032 19 36113021 to 36113025 4 - TSS region transcription start site region 159032
Tssr159033 19 36114282 to 36114316 34 - TSS region transcription start site region 159033
Tssr156173 19 36115241 to 36115252 11 + TSS region transcription start site region 156173
Tssr159034 19 36118138 to 36118152 14 - TSS region transcription start site region 159034
Tssr5493 19 36118236 to 36118246 10 + TSS region transcription start site region 5493
Tssr159035 19 36119249 to 36119262 13 - TSS region transcription start site region 159035
Tssr159036 19 36119282 to 36119303 21 - TSS region transcription start site region 159036
Tssr159037 19 36119357 to 36119367 10 - TSS region transcription start site region 159037
Tssr159038 19 36119713 to 36119723 10 - TSS region transcription start site region 159038
Tssr159039 19 36119833 to 36119847 14 - TSS region transcription start site region 159039
Tssr159040 19 36120094 to 36120106 12 - TSS region transcription start site region 159040
Gm32081 19 36184561 to 36221676 37115 + lncRNA gene predicted gene, 32081
Gm32027 19 36216219 to 36264193 47974 - lncRNA gene predicted gene, 32027
Tssr156174 19 36235472 to 36235481 9 + TSS region transcription start site region 156174
Gm46664 19 36235979 to 36243323 7344 + lncRNA gene predicted gene, 46664
Tssr159041 19 36264178 to 36264185 7 - TSS region transcription start site region 159041
Tssr159042 19 36264190 to 36264200 10 - TSS region transcription start site region 159042
Gm19160 19 36339044 to 36339931 887 - pseudogene predicted gene, 19160
Gm47735 19 36347614 to 36348298 684 - antisense lncRNA gene predicted gene, 47735
Tssr156175 19 36347786 to 36347827 41 + TSS region transcription start site region 156175
Cpgi10777 19 36347930 to 36349657 1727 CpG island CpG island 10777
Tssr156176 19 36348285 to 36348313 28 + TSS region transcription start site region 156176
Pcgf5 19 36348309 to 36460970 112661 + protein coding gene polycomb group ring finger 5
Tssr156177 19 36348317 to 36348353 36 + TSS region transcription start site region 156177
Tssr156178 19 36348384 to 36348395 11 + TSS region transcription start site region 156178
Tssr156179 19 36348412 to 36348423 11 + TSS region transcription start site region 156179
Tssr156180 19 36348470 to 36348500 30 + TSS region transcription start site region 156180
Tssr156181 19 36348506 to 36348550 44 + TSS region transcription start site region 156181
Tssr159043 19 36349287 to 36349319 32 - TSS region transcription start site region 159043
Tssr159044 19 36349401 to 36349417 16 - TSS region transcription start site region 159044
Tssr156182 19 36349576 to 36349584 8 + TSS region transcription start site region 156182
Gm47773 19 36361343 to 36361811 468 + pseudogene predicted gene, 47773
Gm23170 19 36384792 to 36384897 105 - snRNA gene predicted gene, 23170
Gm9042 19 36404447 to 36406110 1663 + pseudogene predicted gene 9042
Tssr156183 19 36404882 to 36404887 5 + TSS region transcription start site region 156183
Cpgi10778 19 36409251 to 36410447 1196 CpG island CpG island 10778
Tssr156184 19 36409630 to 36409662 32 + TSS region transcription start site region 156184
Tssr156185 19 36409669 to 36409691 22 + TSS region transcription start site region 156185
Tssr156186 19 36409719 to 36409757 38 + TSS region transcription start site region 156186
Tssr156187 19 36409762 to 36409771 9 + TSS region transcription start site region 156187
Tssr156188 19 36409833 to 36409856 23 + TSS region transcription start site region 156188
Tssr156189 19 36409911 to 36409920 9 + TSS region transcription start site region 156189
Tssr156190 19 36409967 to 36409978 11 + TSS region transcription start site region 156190
F530104D19Rik 19 36448992 to 36451157 2165 - antisense lncRNA gene RIKEN cDNA F530104D19 gene
Tssr156191 19 36464037 to 36464053 16 + TSS region transcription start site region 156191
Gm32143 19 36533923 to 36538802 4879 - lncRNA gene predicted gene, 32143
Gm41838 19 36552925 to 36553977 1052 - lncRNA gene predicted gene, 41838
Cpgi10779 19 36553839 to 36555475 1636 CpG island CpG island 10779
Hectd2 19 36554639 to 36621135 66496 + protein coding gene HECT domain E3 ubiquitin protein ligase 2
Tssr156192 19 36554661 to 36554688 27 + TSS region transcription start site region 156192
Tssr156193 19 36554690 to 36554714 24 + TSS region transcription start site region 156193
Tssr156194 19 36554719 to 36554731 12 + TSS region transcription start site region 156194
Tssr156195 19 36554742 to 36554773 31 + TSS region transcription start site region 156195
Tssr156196 19 36554774 to 36554793 19 + TSS region transcription start site region 156196
Hectd2os 19 36619418 to 36689479 70061 - lncRNA gene Hectd2, opposite strand
Tssr159045 19 36625998 to 36626035 37 - TSS region transcription start site region 159045
Tssr159046 19 36626045 to 36626061 16 - TSS region transcription start site region 159046
Tssr159047 19 36689269 to 36689306 37 - TSS region transcription start site region 159047
Tssr159048 19 36689319 to 36689368 49 - TSS region transcription start site region 159048