MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 19:35439933-36080065

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm22853	19	35605674 to 35605804	130	-	rRNA gene	predicted gene, 22853
Gm41836	19	35705765 to 35760577	54812	-	lncRNA gene	predicted gene, 41836
Tssr159027	19	35748803 to 35748808	5	-	TSS region	transcription start site region 159027
Gm25611	19	35759933 to 35760065	132	-	snoRNA gene	predicted gene, 25611
Tssr5492	19	35783544 to 35783545	1	+	TSS region	transcription start site region 5492
D19Mit12	19	35810580 to 35810726	146		DNA segment	DNA segment, Chr 19, Massachusetts Institute of Technology 12
A830019P07Rik	19	35835221 to 35924578	89357	-	lincRNA gene	RIKEN cDNA A830019P07 gene
D19Mit133	19	35844193 to 35844305	112		DNA segment	DNA Segment, Chr 19, Massachusetts Institute of Technology 133
Tssr159028	19	35858379 to 35858381	2	-	TSS region	transcription start site region 159028
Gm17926	19	35870079 to 35870772	693	+	pseudogene	predicted gene, 17926
Tssr159029	19	35924488 to 35924508	20	-	TSS region	transcription start site region 159029
Htr7	19	35958734 to 36057507	98773	-	protein coding gene	5-hydroxytryptamine (serotonin) receptor 7
Cpgi10773	19	35969595 to 35969927	332		CpG island	CpG island 10773
Tssr156170	19	35975048 to 35975049	1	+	TSS region	transcription start site region 156170
D19Mit63	19	36039544 to 36039693	149		DNA segment	DNA segment, Chr 19, Massachusetts Institute of Technology 63
Prdt5	19	36039544 to 38910568	2871024		QTL	prion disease incubation time 5
Sluc1	19	36039544 to 46773082	10733538		QTL	susceptibility to lung cancer 1
Cpgi10774	19	36056542 to 36057888	1346		CpG island	CpG island 10774