Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:34620418-40613245

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673 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
dblr 19 26328315 to 37257062 10928747 heritable phenotypic marker doubleridge
Tgct4 19 27794585 to 35317981 7523396 QTL testicular germ cell tumor 4
Ifit1bl2 19 34617049 to 34640743 23694 - protein coding gene interferon induced protein with tetratricopeptide repeats 1B like 2
Cnn2-ps 19 34623630 to 34624804 1174 + pseudogene calponin2, pseudogene
Tssr158994 19 34629809 to 34629813 4 - TSS region transcription start site region 158994
Tssr158995 19 34629852 to 34629870 18 - TSS region transcription start site region 158995
Tssr158996 19 34629876 to 34629887 11 - TSS region transcription start site region 158996
Tssr158997 19 34640716 to 34640729 13 - TSS region transcription start site region 158997
Tssr158998 19 34640735 to 34640749 14 - TSS region transcription start site region 158998
Tssr158999 19 34640759 to 34640793 34 - TSS region transcription start site region 158999
Tssr156139 19 34640873 to 34640897 24 + TSS region transcription start site region 156139
Ifit1 19 34640889 to 34650009 9120 + protein coding gene interferon-induced protein with tetratricopeptide repeats 1
Tssr156140 19 34641124 to 34641132 8 + TSS region transcription start site region 156140
Tssr156141 19 34643065 to 34643082 17 + TSS region transcription start site region 156141
Tssr156142 19 34643324 to 34643330 6 + TSS region transcription start site region 156142
Tssr156143 19 34644216 to 34644227 11 + TSS region transcription start site region 156143
Tssr156144 19 34644244 to 34644255 11 + TSS region transcription start site region 156144
Tssr156145 19 34644335 to 34644343 8 + TSS region transcription start site region 156145
Tssr156146 19 34644576 to 34644599 23 + TSS region transcription start site region 156146
Tssr156147 19 34647916 to 34647921 5 + TSS region transcription start site region 156147
Tssr156148 19 34648263 to 34648272 9 + TSS region transcription start site region 156148
Tssr156149 19 34648831 to 34648843 12 + TSS region transcription start site region 156149
Tssr156150 19 34649036 to 34649043 7 + TSS region transcription start site region 156150
Tssr156151 19 34649104 to 34649118 14 + TSS region transcription start site region 156151
Tssr156152 19 34649128 to 34649139 11 + TSS region transcription start site region 156152
Tssr156153 19 34649141 to 34649157 16 + TSS region transcription start site region 156153
Tssr156154 19 34649169 to 34649180 11 + TSS region transcription start site region 156154
Tssr156155 19 34649181 to 34649195 14 + TSS region transcription start site region 156155
Tssr156156 19 34649218 to 34649238 20 + TSS region transcription start site region 156156
Tssr156157 19 34649286 to 34649328 42 + TSS region transcription start site region 156157
Tssr156158 19 34649335 to 34649400 65 + TSS region transcription start site region 156158
Tssr156159 19 34649423 to 34649439 16 + TSS region transcription start site region 156159
Tssr159000 19 34649717 to 34649728 11 - TSS region transcription start site region 159000
Tssr156160 19 34649753 to 34649784 31 + TSS region transcription start site region 156160
Tssr156161 19 34649807 to 34649832 25 + TSS region transcription start site region 156161
Tssr156162 19 34649891 to 34649907 16 + TSS region transcription start site region 156162
Tssr156163 19 34651711 to 34651730 19 + TSS region transcription start site region 156163
Tssr159001 19 34662394 to 34662433 39 - TSS region transcription start site region 159001
Slc16a12 19 34668403 to 34747289 78886 - protein coding gene solute carrier family 16 (monocarboxylic acid transporters), member 12
Cpgi10769 19 34675148 to 34675432 284 CpG island CpG island 10769
Gm46654 19 34682183 to 34684822 2639 - pseudogene predicted gene, 46654
Tssr159002 19 34691541 to 34691565 24 - TSS region transcription start site region 159002
Gm18425 19 34710062 to 34710964 902 + pseudogene predicted gene, 18425
Tssr159003 19 34716849 to 34716856 7 - TSS region transcription start site region 159003
Tssr159004 19 34716915 to 34716923 8 - TSS region transcription start site region 159004
Tssr156164 19 34746300 to 34746313 13 + TSS region transcription start site region 156164
Cpgi10770 19 34746573 to 34747618 1045 CpG island CpG island 10770
Tssr159005 19 34747100 to 34747115 15 - TSS region transcription start site region 159005
Tssr159006 19 34747133 to 34747186 53 - TSS region transcription start site region 159006
Tssr159007 19 34747194 to 34747219 25 - TSS region transcription start site region 159007
Tssr159008 19 34747223 to 34747251 28 - TSS region transcription start site region 159008
Tssr159009 19 34747291 to 34747313 22 - TSS region transcription start site region 159009
Tssr159010 19 34747321 to 34747335 14 - TSS region transcription start site region 159010
Tssr159011 19 34747434 to 34747449 15 - TSS region transcription start site region 159011
Tssr159012 19 34747453 to 34747468 15 - TSS region transcription start site region 159012
Tssr159013 19 34747483 to 34747494 11 - TSS region transcription start site region 159013
Gm27476 19 34750510 to 34750613 103 + miRNA gene predicted gene, 27476
Gm22082 19 34796178 to 34796338 160 + snRNA gene predicted gene, 22082
Pank1 19 34810894 to 34879455 68561 - protein coding gene pantothenate kinase 1
Tssr159014 19 34811986 to 34811999 13 - TSS region transcription start site region 159014
Tssr159015 19 34812023 to 34812031 8 - TSS region transcription start site region 159015
Mir107 19 34820687 to 34820773 86 - miRNA gene microRNA 107
Tssr156165 19 34836991 to 34836992 1 + TSS region transcription start site region 156165
Tssr159016 19 34856126 to 34856138 12 - TSS region transcription start site region 159016
Tssr159017 19 34877843 to 34877861 18 - TSS region transcription start site region 159017
Tssr159018 19 34877880 to 34877923 43 - TSS region transcription start site region 159018
Cpgi10771 19 34877968 to 34879453 1485 CpG island CpG island 10771
Tssr159019 19 34879178 to 34879194 16 - TSS region transcription start site region 159019
Tssr159020 19 34879201 to 34879212 11 - TSS region transcription start site region 159020
Tssr159021 19 34879221 to 34879230 9 - TSS region transcription start site region 159021
Tssr159022 19 34879247 to 34879268 21 - TSS region transcription start site region 159022
Tssr159023 19 34879288 to 34879313 25 - TSS region transcription start site region 159023
Tssr159024 19 34879332 to 34879398 66 - TSS region transcription start site region 159024
Tssr159025 19 34879452 to 34879465 13 - TSS region transcription start site region 159025
Tssr156166 19 34908143 to 34908158 15 + TSS region transcription start site region 156166
Cpgi10772 19 34921884 to 34922733 849 CpG island CpG island 10772
Tssr159026 19 34922202 to 34922250 48 - TSS region transcription start site region 159026
Tssr156167 19 34922351 to 34922404 53 + TSS region transcription start site region 156167
Kif20b 19 34922361 to 34975745 53384 + protein coding gene kinesin family member 20B
Tssr156168 19 34922409 to 34922418 9 + TSS region transcription start site region 156168
Tssr156169 19 34961833 to 34961868 35 + TSS region transcription start site region 156169
Mir1950 19 34965396 to 34965469 73 + miRNA gene microRNA 1950
Gm5248 19 35051830 to 35052744 914 - lincRNA gene predicted gene 5248
Gm31568 19 35151913 to 35156629 4716 + lncRNA gene predicted gene, 31568
Gm24006 19 35203235 to 35203366 131 + snoRNA gene predicted gene, 24006
Gm23075 19 35276453 to 35276522 69 - miRNA gene predicted gene, 23075
Lfp2 19 35317762 to 35317981 219 QTL long free running period 2
Eae19 19 35317762 to 35317981 219 QTL experimental allergic encephalomyelitis susceptibility 19
D19Mit5 19 35317762 to 35317981 219 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 5
Gm22853 19 35605674 to 35605804 130 - rRNA gene predicted gene, 22853
Gm41836 19 35705765 to 35760577 54812 - lncRNA gene predicted gene, 41836
Tssr159027 19 35748803 to 35748808 5 - TSS region transcription start site region 159027
Gm25611 19 35759933 to 35760065 132 - snoRNA gene predicted gene, 25611
Tssr5492 19 35783544 to 35783545 1 + TSS region transcription start site region 5492
D19Mit12 19 35810580 to 35810726 146 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 12
A830019P07Rik 19 35835221 to 35924578 89357 - lincRNA gene RIKEN cDNA A830019P07 gene
D19Mit133 19 35844193 to 35844305 112 DNA segment DNA Segment, Chr 19, Massachusetts Institute of Technology 133
Tssr159028 19 35858379 to 35858381 2 - TSS region transcription start site region 159028
Gm17926 19 35870079 to 35870772 693 + pseudogene predicted gene, 17926
Tssr159029 19 35924488 to 35924508 20 - TSS region transcription start site region 159029
Htr7 19 35958734 to 36057507 98773 - protein coding gene 5-hydroxytryptamine (serotonin) receptor 7
Cpgi10773 19 35969595 to 35969927 332 CpG island CpG island 10773
Tssr156170 19 35975048 to 35975049 1 + TSS region transcription start site region 156170
D19Mit63 19 36039544 to 36039693 149 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 63
Sluc1 19 36039544 to 46773082 10733538 QTL susceptibility to lung cancer 1
Prdt5 19 36039544 to 38910568 2871024 QTL prion disease incubation time 5
Cpgi10774 19 36056542 to 36057888 1346 CpG island CpG island 10774
Cpgi10775 19 36083640 to 36083908 268 CpG island CpG island 10775
Tssr156171 19 36083696 to 36083736 40 + TSS region transcription start site region 156171
Rpp30 19 36083716 to 36104772 21056 + protein coding gene ribonuclease P/MRP 30 subunit
Tssr156172 19 36083746 to 36083756 10 + TSS region transcription start site region 156172
Cpgi10776 19 36109353 to 36109613 260 CpG island CpG island 10776
Ankrd1 19 36111965 to 36119844 7879 - protein coding gene ankyrin repeat domain 1 (cardiac muscle)
Tssr159030 19 36112056 to 36112095 39 - TSS region transcription start site region 159030
Tssr159031 19 36112317 to 36112323 6 - TSS region transcription start site region 159031
Tssr159032 19 36113021 to 36113025 4 - TSS region transcription start site region 159032
Tssr159033 19 36114282 to 36114316 34 - TSS region transcription start site region 159033
Tssr156173 19 36115241 to 36115252 11 + TSS region transcription start site region 156173
Tssr159034 19 36118138 to 36118152 14 - TSS region transcription start site region 159034
Tssr5493 19 36118236 to 36118246 10 + TSS region transcription start site region 5493
Tssr159035 19 36119249 to 36119262 13 - TSS region transcription start site region 159035
Tssr159036 19 36119282 to 36119303 21 - TSS region transcription start site region 159036
Tssr159037 19 36119357 to 36119367 10 - TSS region transcription start site region 159037
Tssr159038 19 36119713 to 36119723 10 - TSS region transcription start site region 159038
Tssr159039 19 36119833 to 36119847 14 - TSS region transcription start site region 159039
Tssr159040 19 36120094 to 36120106 12 - TSS region transcription start site region 159040
Gm32081 19 36184561 to 36221676 37115 + lncRNA gene predicted gene, 32081
Gm32027 19 36216219 to 36264193 47974 - lncRNA gene predicted gene, 32027
Tssr156174 19 36235472 to 36235481 9 + TSS region transcription start site region 156174
Gm46664 19 36235979 to 36243323 7344 + lncRNA gene predicted gene, 46664
Tssr159041 19 36264178 to 36264185 7 - TSS region transcription start site region 159041
Tssr159042 19 36264190 to 36264200 10 - TSS region transcription start site region 159042
Gm19160 19 36339044 to 36339931 887 - pseudogene predicted gene, 19160
Gm47735 19 36347614 to 36348298 684 - antisense lncRNA gene predicted gene, 47735
Tssr156175 19 36347786 to 36347827 41 + TSS region transcription start site region 156175
Cpgi10777 19 36347930 to 36349657 1727 CpG island CpG island 10777
Tssr156176 19 36348285 to 36348313 28 + TSS region transcription start site region 156176
Pcgf5 19 36348309 to 36460970 112661 + protein coding gene polycomb group ring finger 5
Tssr156177 19 36348317 to 36348353 36 + TSS region transcription start site region 156177
Tssr156178 19 36348384 to 36348395 11 + TSS region transcription start site region 156178
Tssr156179 19 36348412 to 36348423 11 + TSS region transcription start site region 156179
Tssr156180 19 36348470 to 36348500 30 + TSS region transcription start site region 156180
Tssr156181 19 36348506 to 36348550 44 + TSS region transcription start site region 156181
Tssr159043 19 36349287 to 36349319 32 - TSS region transcription start site region 159043
Tssr159044 19 36349401 to 36349417 16 - TSS region transcription start site region 159044
Tssr156182 19 36349576 to 36349584 8 + TSS region transcription start site region 156182
Gm47773 19 36361343 to 36361811 468 + pseudogene predicted gene, 47773
Gm23170 19 36384792 to 36384897 105 - snRNA gene predicted gene, 23170
Gm9042 19 36404447 to 36406110 1663 + pseudogene predicted gene 9042
Tssr156183 19 36404882 to 36404887 5 + TSS region transcription start site region 156183
Cpgi10778 19 36409251 to 36410447 1196 CpG island CpG island 10778
Tssr156184 19 36409630 to 36409662 32 + TSS region transcription start site region 156184
Tssr156185 19 36409669 to 36409691 22 + TSS region transcription start site region 156185
Tssr156186 19 36409719 to 36409757 38 + TSS region transcription start site region 156186
Tssr156187 19 36409762 to 36409771 9 + TSS region transcription start site region 156187
Tssr156188 19 36409833 to 36409856 23 + TSS region transcription start site region 156188
Tssr156189 19 36409911 to 36409920 9 + TSS region transcription start site region 156189
Tssr156190 19 36409967 to 36409978 11 + TSS region transcription start site region 156190
F530104D19Rik 19 36448992 to 36451157 2165 - antisense lncRNA gene RIKEN cDNA F530104D19 gene
Tssr156191 19 36464037 to 36464053 16 + TSS region transcription start site region 156191
Gm32143 19 36533923 to 36538802 4879 - lncRNA gene predicted gene, 32143
Gm41838 19 36552925 to 36553977 1052 - lncRNA gene predicted gene, 41838
Cpgi10779 19 36553839 to 36555475 1636 CpG island CpG island 10779
Hectd2 19 36554639 to 36621135 66496 + protein coding gene HECT domain E3 ubiquitin protein ligase 2
Tssr156192 19 36554661 to 36554688 27 + TSS region transcription start site region 156192
Tssr156193 19 36554690 to 36554714 24 + TSS region transcription start site region 156193
Tssr156194 19 36554719 to 36554731 12 + TSS region transcription start site region 156194
Tssr156195 19 36554742 to 36554773 31 + TSS region transcription start site region 156195
Tssr156196 19 36554774 to 36554793 19 + TSS region transcription start site region 156196
Hectd2os 19 36619418 to 36689479 70061 - lncRNA gene Hectd2, opposite strand
Tssr159045 19 36625998 to 36626035 37 - TSS region transcription start site region 159045
Tssr159046 19 36626045 to 36626061 16 - TSS region transcription start site region 159046
Tssr159047 19 36689269 to 36689306 37 - TSS region transcription start site region 159047
Tssr159048 19 36689319 to 36689368 49 - TSS region transcription start site region 159048
Ppp1r3c 19 36731731 to 36736604 4873 - protein coding gene protein phosphatase 1, regulatory subunit 3C
Cpgi10780 19 36736461 to 36737096 635 CpG island CpG island 10780
Tssr159049 19 36736656 to 36736670 14 - TSS region transcription start site region 159049
Tssr159050 19 36797084 to 36797094 10 - TSS region transcription start site region 159050
Cpgi10781 19 36815461 to 36815636 175 CpG island CpG island 10781
Cpgi10782 19 36818276 to 36818508 232 CpG island CpG island 10782
Tssr156197 19 36833178 to 36833195 17 + TSS region transcription start site region 156197
Cpgi10783 19 36833961 to 36834943 982 CpG island CpG island 10783
Tssr156198 19 36834196 to 36834208 12 + TSS region transcription start site region 156198
Tssr156199 19 36834215 to 36834297 82 + TSS region transcription start site region 156199
Tnks2 19 36834232 to 36893477 59245 + protein coding gene tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
Tssr156200 19 36834304 to 36834309 5 + TSS region transcription start site region 156200
Tssr156201 19 36879260 to 36879279 19 + TSS region transcription start site region 156201
Tssr156202 19 36890791 to 36890814 23 + TSS region transcription start site region 156202
Cpgi10784 19 36904073 to 36904750 677 CpG island CpG island 10784
Tssr156203 19 36917067 to 36917075 8 + TSS region transcription start site region 156203
Fgfbp3 19 36917550 to 36919599 2049 - protein coding gene fibroblast growth factor binding protein 3
Tssr159051 19 36918248 to 36918287 39 - TSS region transcription start site region 159051
Cpgi10785 19 36918377 to 36919410 1033 CpG island CpG island 10785
Tssr159052 19 36919052 to 36919064 12 - TSS region transcription start site region 159052
Tssr159053 19 36919077 to 36919134 57 - TSS region transcription start site region 159053
Tssr159054 19 36919606 to 36919622 16 - TSS region transcription start site region 159054
Tssr159055 19 36919631 to 36919646 15 - TSS region transcription start site region 159055
Tssr159056 19 36919652 to 36919659 7 - TSS region transcription start site region 159056
Cpgi10786 19 36925609 to 36926678 1069 CpG island CpG island 10786
Tssr159057 19 36926027 to 36926056 29 - TSS region transcription start site region 159057