Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:34577361-35320745

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97 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tgct4 19 27794585 to 35317981 7523396 QTL testicular germ cell tumor 4
Tssr156134 19 34583136 to 34583140 4 + TSS region transcription start site region 156134
Tssr156135 19 34583528 to 34583533 5 + TSS region transcription start site region 156135
Ifit3 19 34583531 to 34588731 5200 + protein coding gene interferon-induced protein with tetratricopeptide repeats 3
Ifit1bl1 19 34592888 to 34601968 9080 - protein coding gene interferon induced protein with tetratricpeptide repeats 1B like 1
Tssr158993 19 34602060 to 34602075 15 - TSS region transcription start site region 158993
Tssr156136 19 34607523 to 34607536 13 + TSS region transcription start site region 156136
Tssr156137 19 34607927 to 34607936 9 + TSS region transcription start site region 156137
Ifit3b 19 34607970 to 34613401 5431 + protein coding gene interferon-induced protein with tetratricopeptide repeats 3B
Tssr156138 19 34613026 to 34613040 14 + TSS region transcription start site region 156138
Ifit1bl2 19 34617049 to 34640743 23694 - protein coding gene interferon induced protein with tetratricopeptide repeats 1B like 2
Cnn2-ps 19 34623630 to 34624804 1174 + pseudogene calponin2, pseudogene
Tssr158994 19 34629809 to 34629813 4 - TSS region transcription start site region 158994
Tssr158995 19 34629852 to 34629870 18 - TSS region transcription start site region 158995
Tssr158996 19 34629876 to 34629887 11 - TSS region transcription start site region 158996
Tssr158997 19 34640716 to 34640729 13 - TSS region transcription start site region 158997
Tssr158998 19 34640735 to 34640749 14 - TSS region transcription start site region 158998
Tssr158999 19 34640759 to 34640793 34 - TSS region transcription start site region 158999
Tssr156139 19 34640873 to 34640897 24 + TSS region transcription start site region 156139
Ifit1 19 34640889 to 34650009 9120 + protein coding gene interferon-induced protein with tetratricopeptide repeats 1
Tssr156140 19 34641124 to 34641132 8 + TSS region transcription start site region 156140
Tssr156141 19 34643065 to 34643082 17 + TSS region transcription start site region 156141
Tssr156142 19 34643324 to 34643330 6 + TSS region transcription start site region 156142
Tssr156143 19 34644216 to 34644227 11 + TSS region transcription start site region 156143
Tssr156144 19 34644244 to 34644255 11 + TSS region transcription start site region 156144
Tssr156145 19 34644335 to 34644343 8 + TSS region transcription start site region 156145
Tssr156146 19 34644576 to 34644599 23 + TSS region transcription start site region 156146
Tssr156147 19 34647916 to 34647921 5 + TSS region transcription start site region 156147
Tssr156148 19 34648263 to 34648272 9 + TSS region transcription start site region 156148
Tssr156149 19 34648831 to 34648843 12 + TSS region transcription start site region 156149
Tssr156150 19 34649036 to 34649043 7 + TSS region transcription start site region 156150
Tssr156151 19 34649104 to 34649118 14 + TSS region transcription start site region 156151
Tssr156152 19 34649128 to 34649139 11 + TSS region transcription start site region 156152
Tssr156153 19 34649141 to 34649157 16 + TSS region transcription start site region 156153
Tssr156154 19 34649169 to 34649180 11 + TSS region transcription start site region 156154
Tssr156155 19 34649181 to 34649195 14 + TSS region transcription start site region 156155
Tssr156156 19 34649218 to 34649238 20 + TSS region transcription start site region 156156
Tssr156157 19 34649286 to 34649328 42 + TSS region transcription start site region 156157
Tssr156158 19 34649335 to 34649400 65 + TSS region transcription start site region 156158
Tssr156159 19 34649423 to 34649439 16 + TSS region transcription start site region 156159
Tssr159000 19 34649717 to 34649728 11 - TSS region transcription start site region 159000
Tssr156160 19 34649753 to 34649784 31 + TSS region transcription start site region 156160
Tssr156161 19 34649807 to 34649832 25 + TSS region transcription start site region 156161
Tssr156162 19 34649891 to 34649907 16 + TSS region transcription start site region 156162
Tssr156163 19 34651711 to 34651730 19 + TSS region transcription start site region 156163
Tssr159001 19 34662394 to 34662433 39 - TSS region transcription start site region 159001
Slc16a12 19 34668403 to 34747289 78886 - protein coding gene solute carrier family 16 (monocarboxylic acid transporters), member 12
Cpgi10769 19 34675148 to 34675432 284 CpG island CpG island 10769
Gm46654 19 34682183 to 34684822 2639 - pseudogene predicted gene, 46654
Tssr159002 19 34691541 to 34691565 24 - TSS region transcription start site region 159002
Gm18425 19 34710062 to 34710964 902 + pseudogene predicted gene, 18425
Tssr159003 19 34716849 to 34716856 7 - TSS region transcription start site region 159003
Tssr159004 19 34716915 to 34716923 8 - TSS region transcription start site region 159004
Tssr156164 19 34746300 to 34746313 13 + TSS region transcription start site region 156164
Cpgi10770 19 34746573 to 34747618 1045 CpG island CpG island 10770
Tssr159005 19 34747100 to 34747115 15 - TSS region transcription start site region 159005
Tssr159006 19 34747133 to 34747186 53 - TSS region transcription start site region 159006
Tssr159007 19 34747194 to 34747219 25 - TSS region transcription start site region 159007
Tssr159008 19 34747223 to 34747251 28 - TSS region transcription start site region 159008
Tssr159009 19 34747291 to 34747313 22 - TSS region transcription start site region 159009
Tssr159010 19 34747321 to 34747335 14 - TSS region transcription start site region 159010
Tssr159011 19 34747434 to 34747449 15 - TSS region transcription start site region 159011
Tssr159012 19 34747453 to 34747468 15 - TSS region transcription start site region 159012
Tssr159013 19 34747483 to 34747494 11 - TSS region transcription start site region 159013
Gm27476 19 34750510 to 34750613 103 + miRNA gene predicted gene, 27476
Gm22082 19 34796178 to 34796338 160 + snRNA gene predicted gene, 22082
Pank1 19 34810894 to 34879455 68561 - protein coding gene pantothenate kinase 1
Tssr159014 19 34811986 to 34811999 13 - TSS region transcription start site region 159014
Tssr159015 19 34812023 to 34812031 8 - TSS region transcription start site region 159015
Mir107 19 34820687 to 34820773 86 - miRNA gene microRNA 107
Tssr156165 19 34836991 to 34836992 1 + TSS region transcription start site region 156165
Tssr159016 19 34856126 to 34856138 12 - TSS region transcription start site region 159016
Tssr159017 19 34877843 to 34877861 18 - TSS region transcription start site region 159017
Tssr159018 19 34877880 to 34877923 43 - TSS region transcription start site region 159018
Cpgi10771 19 34877968 to 34879453 1485 CpG island CpG island 10771
Tssr159019 19 34879178 to 34879194 16 - TSS region transcription start site region 159019
Tssr159020 19 34879201 to 34879212 11 - TSS region transcription start site region 159020
Tssr159021 19 34879221 to 34879230 9 - TSS region transcription start site region 159021
Tssr159022 19 34879247 to 34879268 21 - TSS region transcription start site region 159022
Tssr159023 19 34879288 to 34879313 25 - TSS region transcription start site region 159023
Tssr159024 19 34879332 to 34879398 66 - TSS region transcription start site region 159024
Tssr159025 19 34879452 to 34879465 13 - TSS region transcription start site region 159025
Tssr156166 19 34908143 to 34908158 15 + TSS region transcription start site region 156166
Cpgi10772 19 34921884 to 34922733 849 CpG island CpG island 10772
Tssr159026 19 34922202 to 34922250 48 - TSS region transcription start site region 159026
Tssr156167 19 34922351 to 34922404 53 + TSS region transcription start site region 156167
Kif20b 19 34922361 to 34975745 53384 + protein coding gene kinesin family member 20B
Tssr156168 19 34922409 to 34922418 9 + TSS region transcription start site region 156168
Tssr156169 19 34961833 to 34961868 35 + TSS region transcription start site region 156169
Mir1950 19 34965396 to 34965469 73 + miRNA gene microRNA 1950
Gm5248 19 35051830 to 35052744 914 - lincRNA gene predicted gene 5248
Gm31568 19 35151913 to 35156629 4716 + lncRNA gene predicted gene, 31568
Gm24006 19 35203235 to 35203366 131 + snoRNA gene predicted gene, 24006
Gm23075 19 35276453 to 35276522 69 - miRNA gene predicted gene, 23075
Lfp2 19 35317762 to 35317981 219 QTL long free running period 2
Eae19 19 35317762 to 35317981 219 QTL experimental allergic encephalomyelitis susceptibility 19
D19Mit5 19 35317762 to 35317981 219 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 5