Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:34240647-34550755

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113 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Acta2 19 34241090 to 34255336 14246 - protein coding gene actin, alpha 2, smooth muscle, aorta
Tssr158925 19 34241655 to 34241684 29 - TSS region transcription start site region 158925
Tssr158926 19 34241689 to 34241700 11 - TSS region transcription start site region 158926
Tssr156064 19 34241692 to 34241709 17 + TSS region transcription start site region 156064
Tssr156065 19 34241765 to 34241791 26 + TSS region transcription start site region 156065
Tssr158927 19 34243343 to 34243361 18 - TSS region transcription start site region 158927
Tssr156066 19 34243402 to 34243436 34 + TSS region transcription start site region 156066
Tssr158928 19 34243457 to 34243500 43 - TSS region transcription start site region 158928
Tssr156067 19 34243458 to 34243472 14 + TSS region transcription start site region 156067
Tssr156068 19 34244940 to 34244973 33 + TSS region transcription start site region 156068
Tssr158929 19 34244946 to 34244965 19 - TSS region transcription start site region 158929
Tssr158930 19 34244991 to 34245039 48 - TSS region transcription start site region 158930
Tssr158931 19 34245084 to 34245106 22 - TSS region transcription start site region 158931
Tssr158932 19 34246135 to 34246144 9 - TSS region transcription start site region 158932
Tssr158933 19 34246149 to 34246154 5 - TSS region transcription start site region 158933
Tssr156069 19 34246170 to 34246212 42 + TSS region transcription start site region 156069
Tssr158934 19 34246176 to 34246191 15 - TSS region transcription start site region 158934
Tssr158935 19 34246702 to 34246731 29 - TSS region transcription start site region 158935
Tssr158936 19 34248044 to 34248048 4 - TSS region transcription start site region 158936
Tssr156070 19 34248424 to 34248449 25 + TSS region transcription start site region 156070
Tssr158937 19 34248454 to 34248543 89 - TSS region transcription start site region 158937
Tssr156071 19 34248497 to 34248508 11 + TSS region transcription start site region 156071
Tssr158938 19 34248668 to 34248685 17 - TSS region transcription start site region 158938
Tssr5490 19 34248686 to 34248702 16 - TSS region transcription start site region 5490
Tssr158939 19 34249256 to 34249260 4 - TSS region transcription start site region 158939
Tssr158940 19 34249331 to 34249359 28 - TSS region transcription start site region 158940
Tssr158941 19 34251072 to 34251078 6 - TSS region transcription start site region 158941
Tssr156072 19 34251726 to 34251741 15 + TSS region transcription start site region 156072
Tssr156073 19 34251742 to 34251802 60 + TSS region transcription start site region 156073
Tssr158942 19 34251776 to 34251821 45 - TSS region transcription start site region 158942
Tssr156074 19 34251804 to 34251819 15 + TSS region transcription start site region 156074
Tssr158943 19 34251833 to 34251840 7 - TSS region transcription start site region 158943
Tssr158944 19 34251849 to 34251861 12 - TSS region transcription start site region 158944
Tssr158945 19 34252448 to 34252467 19 - TSS region transcription start site region 158945
Tssr158946 19 34252469 to 34252494 25 - TSS region transcription start site region 158946
Tssr158947 19 34252501 to 34252523 22 - TSS region transcription start site region 158947
Tssr158948 19 34252526 to 34252547 21 - TSS region transcription start site region 158948
Tssr158949 19 34252558 to 34252574 16 - TSS region transcription start site region 158949
Tssr5491 19 34252582 to 34252591 9 - TSS region transcription start site region 5491
Tssr158950 19 34254201 to 34254260 59 - TSS region transcription start site region 158950
Tssr158951 19 34255325 to 34255342 17 - TSS region transcription start site region 158951
Gm31355 19 34256636 to 34278225 21589 - lncRNA gene predicted gene, 31355
D19Mit87 19 34280075 to 34280223 148 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 87
Cpgi10765 19 34290588 to 34290859 271 CpG island CpG island 10765
Tssr156075 19 34290653 to 34290668 15 + TSS region transcription start site region 156075
Fas 19 34290659 to 34327770 37111 + protein coding gene Fas (TNF receptor superfamily member 6)
Tssr156076 19 34290670 to 34290716 46 + TSS region transcription start site region 156076
Tssr156077 19 34292402 to 34292406 4 + TSS region transcription start site region 156077
Gm27818 19 34294137 to 34294295 158 + unclassified non-coding RNA gene predicted gene, 27818
Tssr156078 19 34307024 to 34307049 25 + TSS region transcription start site region 156078
Tssr156079 19 34309985 to 34309987 2 + TSS region transcription start site region 156079
Tssr156080 19 34313700 to 34313708 8 + TSS region transcription start site region 156080
Gm23060 19 34395647 to 34395755 108 - miRNA gene predicted gene, 23060
Ch25h 19 34473786 to 34475135 1349 - protein coding gene cholesterol 25-hydroxylase
Cpgi10766 19 34474236 to 34475126 890 CpG island CpG island 10766
Gm26902 19 34474808 to 34481546 6738 + lincRNA gene predicted gene, 26902
Tssr158952 19 34475143 to 34475151 8 - TSS region transcription start site region 158952
Cpgi10767 19 34475450 to 34475762 312 CpG island CpG island 10767
Tssr156081 19 34492316 to 34492320 4 + TSS region transcription start site region 156081
Lipa 19 34492318 to 34527474 35156 - protein coding gene lysosomal acid lipase A
Tssr156082 19 34492709 to 34492755 46 + TSS region transcription start site region 156082
Tssr158953 19 34492718 to 34492734 16 - TSS region transcription start site region 158953
Tssr156083 19 34492818 to 34492838 20 + TSS region transcription start site region 156083
Tssr156084 19 34492840 to 34492855 15 + TSS region transcription start site region 156084
Tssr158954 19 34492863 to 34492892 29 - TSS region transcription start site region 158954
Tssr156085 19 34492872 to 34492916 44 + TSS region transcription start site region 156085
Tssr158955 19 34492935 to 34492946 11 - TSS region transcription start site region 158955
Tssr158956 19 34493005 to 34493084 79 - TSS region transcription start site region 158956
Tssr156086 19 34493087 to 34493107 20 + TSS region transcription start site region 156086
Tssr158957 19 34493139 to 34493179 40 - TSS region transcription start site region 158957
Tssr158958 19 34493196 to 34493211 15 - TSS region transcription start site region 158958
Tssr158959 19 34493323 to 34493338 15 - TSS region transcription start site region 158959
Tssr158960 19 34493355 to 34493358 3 - TSS region transcription start site region 158960
Tssr156087 19 34493360 to 34493388 28 + TSS region transcription start site region 156087
Tssr158961 19 34493405 to 34493427 22 - TSS region transcription start site region 158961
Tssr158962 19 34493438 to 34493456 18 - TSS region transcription start site region 158962
Tssr158963 19 34493459 to 34493476 17 - TSS region transcription start site region 158963
Tssr156088 19 34493476 to 34493499 23 + TSS region transcription start site region 156088
Tssr158964 19 34493486 to 34493515 29 - TSS region transcription start site region 158964
Tssr158965 19 34493625 to 34493640 15 - TSS region transcription start site region 158965
Tssr158966 19 34493650 to 34493662 12 - TSS region transcription start site region 158966
Tssr158967 19 34493695 to 34493706 11 - TSS region transcription start site region 158967
Tssr158968 19 34493829 to 34493848 19 - TSS region transcription start site region 158968
Tssr158969 19 34493860 to 34493867 7 - TSS region transcription start site region 158969
Tssr158970 19 34493873 to 34493884 11 - TSS region transcription start site region 158970
Tssr158971 19 34493885 to 34493896 11 - TSS region transcription start site region 158971
Tssr158972 19 34493914 to 34493925 11 - TSS region transcription start site region 158972
Tssr158973 19 34494080 to 34494161 81 - TSS region transcription start site region 158973
Tssr158974 19 34494164 to 34494224 60 - TSS region transcription start site region 158974
Tssr158975 19 34495106 to 34495140 34 - TSS region transcription start site region 158975
Tssr158976 19 34498966 to 34498994 28 - TSS region transcription start site region 158976
Tssr158977 19 34499007 to 34499020 13 - TSS region transcription start site region 158977
Tssr158978 19 34499194 to 34499211 17 - TSS region transcription start site region 158978
Tssr158979 19 34499337 to 34499350 13 - TSS region transcription start site region 158979
Tssr158980 19 34500141 to 34500172 31 - TSS region transcription start site region 158980
Tssr158981 19 34507030 to 34507101 71 - TSS region transcription start site region 158981
Tssr158982 19 34507117 to 34507155 38 - TSS region transcription start site region 158982
Tssr158983 19 34509053 to 34509107 54 - TSS region transcription start site region 158983
Tssr158984 19 34509830 to 34509850 20 - TSS region transcription start site region 158984
Tssr158985 19 34510784 to 34510795 11 - TSS region transcription start site region 158985
Tssr158986 19 34515085 to 34515098 13 - TSS region transcription start site region 158986
Tssr158987 19 34523437 to 34523545 108 - TSS region transcription start site region 158987
Tssr158988 19 34524443 to 34524467 24 - TSS region transcription start site region 158988
Tssr158989 19 34524592 to 34524619 27 - TSS region transcription start site region 158989
Tssr156089 19 34524727 to 34524775 48 + TSS region transcription start site region 156089
Tssr158990 19 34524990 to 34525023 33 - TSS region transcription start site region 158990
Tssr158991 19 34526276 to 34526293 17 - TSS region transcription start site region 158991
Cpgi10768 19 34527018 to 34527475 457 CpG island CpG island 10768
Tssr158992 19 34527396 to 34527481 85 - TSS region transcription start site region 158992
Gm31417 19 34543288 to 34544729 1441 - lncRNA gene predicted gene, 31417
Tssr156090 19 34550644 to 34550656 12 + TSS region transcription start site region 156090
Tssr156091 19 34550664 to 34550702 38 + TSS region transcription start site region 156091
Ifit2 19 34550694 to 34576419 25725 + protein coding gene interferon-induced protein with tetratricopeptide repeats 2