Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:33324670-34146359

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rnls 19 33137747 to 33392295 254548 - polymorphic pseudogene renalase, FAD-dependent amine oxidase
Gm17842 19 33353066 to 33354120 1054 - pseudogene predicted gene, 17842
Cpgi10763 19 33391656 to 33392279 623 CpG island CpG island 10763
Tssr156012 19 33391795 to 33391844 49 + TSS region transcription start site region 156012
Tssr158912 19 33392095 to 33392119 24 - TSS region transcription start site region 158912
Tssr158913 19 33392231 to 33392242 11 - TSS region transcription start site region 158913
Tssr158914 19 33392255 to 33392300 45 - TSS region transcription start site region 158914
Gm29998 19 33392433 to 33420370 27937 + lncRNA gene predicted gene, 29998
Gm7237 19 33409131 to 33420642 11511 - lincRNA gene predicted gene 7237
Gm19724 19 33447613 to 33447798 185 - pseudogene predicted gene, 19724
Tssr158915 19 33447795 to 33447807 12 - TSS region transcription start site region 158915
Lipo5 19 33460123 to 33473181 13058 - protein coding gene lipase, member O5
Lipo4 19 33499049 to 33517770 18721 - protein coding gene lipase, member O4
Lipo3 19 33555160 to 33590644 35484 - protein coding gene lipase, member O3
1700001A13Rik 19 33589970 to 33590998 1028 unclassified gene RIKEN cDNA 1700001A13 gene
Gm27440 19 33592607 to 33592713 106 - miRNA gene predicted gene, 27440
Gm8978 19 33613149 to 33625249 12100 - sense intronic lncRNA gene predicted gene 8978
Tssr158916 19 33626338 to 33626345 7 - TSS region transcription start site region 158916
Gm19755 19 33668266 to 33668463 197 - pseudogene predicted gene, 19755
Gm18293 19 33673331 to 33673928 597 - pseudogene predicted gene, 18293
Gm8980 19 33674173 to 33688481 14308 - pseudogene predicted gene 8980
Lipo2 19 33719670 to 33762109 42439 - protein coding gene lipase, member O2
Lipo1 19 33776037 to 33787452 11415 - protein coding gene lipase, member O1
Tssr158917 19 33788543 to 33788583 40 - TSS region transcription start site region 158917
Gm5519 19 33822908 to 33825071 2163 + pseudogene predicted pseudogene 5519
Gm8988 19 33838827 to 33842598 3771 - pseudogene predicted gene 8988
Gm23095 19 33954235 to 33954341 106 + snRNA gene predicted gene, 23095
Tssr156013 19 33961149 to 33961154 5 + TSS region transcription start site region 156013
Tssr156014 19 33961157 to 33961162 5 + TSS region transcription start site region 156014
Tssr156015 19 33961184 to 33961187 3 + TSS region transcription start site region 156015
Tssr156016 19 33961195 to 33961210 15 + TSS region transcription start site region 156016
Tssr156017 19 33961214 to 33961255 41 + TSS region transcription start site region 156017
Lipf 19 33961248 to 33976813 15565 + protein coding gene lipase, gastric
Tssr156018 19 33964540 to 33964552 12 + TSS region transcription start site region 156018
Tssr156019 19 33964845 to 33964855 10 + TSS region transcription start site region 156019
Tssr5488 19 33965649 to 33965650 1 + TSS region transcription start site region 5488
Tssr158918 19 33966909 to 33966922 13 - TSS region transcription start site region 158918
Tssr156020 19 33968763 to 33968774 11 + TSS region transcription start site region 156020
Tssr156021 19 33970756 to 33970761 5 + TSS region transcription start site region 156021
Tssr156022 19 33970770 to 33970778 8 + TSS region transcription start site region 156022
Tssr156023 19 33970818 to 33970830 12 + TSS region transcription start site region 156023
Tssr156024 19 33973020 to 33973066 46 + TSS region transcription start site region 156024
Tssr156025 19 33976469 to 33976478 9 + TSS region transcription start site region 156025
Tssr156026 19 33976718 to 33976732 14 + TSS region transcription start site region 156026
Tssr156027 19 34008247 to 34008269 22 + TSS region transcription start site region 156027
Tssr156028 19 34008284 to 34008295 11 + TSS region transcription start site region 156028
Lipk 19 34008290 to 34047835 39545 + protein coding gene lipase, family member K
Tssr156029 19 34008300 to 34008310 10 + TSS region transcription start site region 156029
Tssr156030 19 34008323 to 34008338 15 + TSS region transcription start site region 156030
Tssr158919 19 34008356 to 34008367 11 - TSS region transcription start site region 158919
Gm31300 19 34056305 to 34058360 2055 - lncRNA gene predicted gene, 31300
Tssr156031 19 34067346 to 34067362 16 + TSS region transcription start site region 156031
Lipn 19 34067358 to 34084918 17560 + protein coding gene lipase, family member N
Tssr156032 19 34067390 to 34067402 12 + TSS region transcription start site region 156032
Tssr156033 19 34067525 to 34067534 9 + TSS region transcription start site region 156033
Gm23334 19 34068931 to 34069054 123 + miRNA gene predicted gene, 23334
Tssr156034 19 34085174 to 34085181 7 + TSS region transcription start site region 156034
Tssr156035 19 34085296 to 34085307 11 + TSS region transcription start site region 156035
Tssr156036 19 34085370 to 34085382 12 + TSS region transcription start site region 156036
Tssr156037 19 34085450 to 34085464 14 + TSS region transcription start site region 156037
Tssr156038 19 34085477 to 34085486 9 + TSS region transcription start site region 156038
Tssr156039 19 34085542 to 34085554 12 + TSS region transcription start site region 156039
Tssr156040 19 34085574 to 34085584 10 + TSS region transcription start site region 156040
Tssr156041 19 34085623 to 34085640 17 + TSS region transcription start site region 156041
Lipm 19 34100943 to 34122687 21744 + protein coding gene lipase, family member M
Tssr156042 19 34100955 to 34100983 28 + TSS region transcription start site region 156042
Tssr156043 19 34101005 to 34101016 11 + TSS region transcription start site region 156043
Tssr156044 19 34101071 to 34101085 14 + TSS region transcription start site region 156044
Tssr156045 19 34101114 to 34101125 11 + TSS region transcription start site region 156045
Ankrd22 19 34122549 to 34166041 43492 - protein coding gene ankyrin repeat domain 22