Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:33117795-33777807

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm29946 19 33122661 to 33133603 10942 + lncRNA gene predicted gene, 29946
Rnls 19 33137747 to 33392295 254548 - polymorphic pseudogene renalase, FAD-dependent amine oxidase
Mir3970 19 33157112 to 33157201 89 + miRNA gene microRNA 3970
Tssr158910 19 33177180 to 33177182 2 - TSS region transcription start site region 158910
Tssr158911 19 33224307 to 33224314 7 - TSS region transcription start site region 158911
D19Mit81 19 33297097 to 33297197 100 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 81
Gm17842 19 33353066 to 33354120 1054 - pseudogene predicted gene, 17842
Cpgi10763 19 33391656 to 33392279 623 CpG island CpG island 10763
Tssr156012 19 33391795 to 33391844 49 + TSS region transcription start site region 156012
Tssr158912 19 33392095 to 33392119 24 - TSS region transcription start site region 158912
Tssr158913 19 33392231 to 33392242 11 - TSS region transcription start site region 158913
Tssr158914 19 33392255 to 33392300 45 - TSS region transcription start site region 158914
Gm29998 19 33392433 to 33420370 27937 + lncRNA gene predicted gene, 29998
Gm7237 19 33409131 to 33420642 11511 - lincRNA gene predicted gene 7237
Gm19724 19 33447613 to 33447798 185 - pseudogene predicted gene, 19724
Tssr158915 19 33447795 to 33447807 12 - TSS region transcription start site region 158915
Lipo5 19 33460123 to 33473181 13058 - protein coding gene lipase, member O5
Lipo4 19 33499049 to 33517770 18721 - protein coding gene lipase, member O4
Lipo3 19 33555160 to 33590644 35484 - protein coding gene lipase, member O3
1700001A13Rik 19 33589970 to 33590998 1028 unclassified gene RIKEN cDNA 1700001A13 gene
Gm27440 19 33592607 to 33592713 106 - miRNA gene predicted gene, 27440
Gm8978 19 33613149 to 33625249 12100 - sense intronic lncRNA gene predicted gene 8978
Tssr158916 19 33626338 to 33626345 7 - TSS region transcription start site region 158916
Gm19755 19 33668266 to 33668463 197 - pseudogene predicted gene, 19755
Gm18293 19 33673331 to 33673928 597 - pseudogene predicted gene, 18293
Gm8980 19 33674173 to 33688481 14308 - pseudogene predicted gene 8980
Lipo2 19 33719670 to 33762109 42439 - protein coding gene lipase, member O2
Lipo1 19 33776037 to 33787452 11415 - protein coding gene lipase, member O1