Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:32824131-34005642

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74 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tgct3 19 22006727 to 32935319 10928592 QTL testicular germ cell tumor 3
Pten 19 32757577 to 32826160 68583 + protein coding gene phosphatase and tensin homolog
Tssr158901 19 32906184 to 32906205 21 - TSS region transcription start site region 158901
Gm36774 19 32933345 to 32939008 5663 + lncRNA gene predicted gene, 36774
Alcp23 19 32935207 to 32935319 112 QTL alcohol preference locus 23, male specific
Alcp24 19 32935207 to 32935319 112 QTL alcohol preference locus 24, female specific
D19Mit46 19 32935207 to 32935319 112 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 46
Tssr156007 19 32952631 to 32952658 27 + TSS region transcription start site region 156007
Tssr158902 19 32956542 to 32956543 1 - TSS region transcription start site region 158902
Tssr158903 19 32957018 to 32957035 17 - TSS region transcription start site region 158903
Tssr158904 19 32957036 to 32957062 26 - TSS region transcription start site region 158904
Gm36914 19 32959987 to 32976159 16172 + lncRNA gene predicted gene, 36914
Tssr156008 19 32960130 to 32960171 41 + TSS region transcription start site region 156008
Gm36860 19 32966066 to 32980390 14324 - lncRNA gene predicted gene, 36860
Gm22482 19 32969950 to 32970308 358 - unclassified non-coding RNA gene predicted gene, 22482
Tssr156009 19 32975547 to 32975551 4 + TSS region transcription start site region 156009
Tssr158905 19 32980239 to 32980250 11 - TSS region transcription start site region 158905
Tssr158906 19 32980262 to 32980280 18 - TSS region transcription start site region 158906
Tssr158907 19 32980284 to 32980305 21 - TSS region transcription start site region 158907
Tssr156010 19 32987931 to 32987972 41 + TSS region transcription start site region 156010
Tssr158908 19 33012820 to 33012854 34 - TSS region transcription start site region 158908
Gm41835 19 33039471 to 33074928 35457 - lncRNA gene predicted gene, 41835
Gm29863 19 33085781 to 33102161 16380 + lncRNA gene predicted gene, 29863
Tssr158909 19 33108202 to 33108206 4 - TSS region transcription start site region 158909
Tssr156011 19 33115413 to 33115416 3 + TSS region transcription start site region 156011
Gm29946 19 33122661 to 33133603 10942 + lncRNA gene predicted gene, 29946
Rnls 19 33137747 to 33392295 254548 - polymorphic pseudogene renalase, FAD-dependent amine oxidase
Mir3970 19 33157112 to 33157201 89 + miRNA gene microRNA 3970
Tssr158910 19 33177180 to 33177182 2 - TSS region transcription start site region 158910
Tssr158911 19 33224307 to 33224314 7 - TSS region transcription start site region 158911
D19Mit81 19 33297097 to 33297197 100 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 81
Gm17842 19 33353066 to 33354120 1054 - pseudogene predicted gene, 17842
Cpgi10763 19 33391656 to 33392279 623 CpG island CpG island 10763
Tssr156012 19 33391795 to 33391844 49 + TSS region transcription start site region 156012
Tssr158912 19 33392095 to 33392119 24 - TSS region transcription start site region 158912
Tssr158913 19 33392231 to 33392242 11 - TSS region transcription start site region 158913
Tssr158914 19 33392255 to 33392300 45 - TSS region transcription start site region 158914
Gm29998 19 33392433 to 33420370 27937 + lncRNA gene predicted gene, 29998
Gm7237 19 33409131 to 33420642 11511 - lincRNA gene predicted gene 7237
Gm19724 19 33447613 to 33447798 185 - pseudogene predicted gene, 19724
Tssr158915 19 33447795 to 33447807 12 - TSS region transcription start site region 158915
Lipo5 19 33460123 to 33473181 13058 - protein coding gene lipase, member O5
Lipo4 19 33499049 to 33517770 18721 - protein coding gene lipase, member O4
Lipo3 19 33555160 to 33590644 35484 - protein coding gene lipase, member O3
1700001A13Rik 19 33589970 to 33590998 1028 unclassified gene RIKEN cDNA 1700001A13 gene
Gm27440 19 33592607 to 33592713 106 - miRNA gene predicted gene, 27440
Gm8978 19 33613149 to 33625249 12100 - sense intronic lncRNA gene predicted gene 8978
Tssr158916 19 33626338 to 33626345 7 - TSS region transcription start site region 158916
Gm19755 19 33668266 to 33668463 197 - pseudogene predicted gene, 19755
Gm18293 19 33673331 to 33673928 597 - pseudogene predicted gene, 18293
Gm8980 19 33674173 to 33688481 14308 - pseudogene predicted gene 8980
Lipo2 19 33719670 to 33762109 42439 - protein coding gene lipase, member O2
Lipo1 19 33776037 to 33787452 11415 - protein coding gene lipase, member O1
Tssr158917 19 33788543 to 33788583 40 - TSS region transcription start site region 158917
Gm5519 19 33822908 to 33825071 2163 + pseudogene predicted pseudogene 5519
Gm8988 19 33838827 to 33842598 3771 - pseudogene predicted gene 8988
Gm23095 19 33954235 to 33954341 106 + snRNA gene predicted gene, 23095
Tssr156013 19 33961149 to 33961154 5 + TSS region transcription start site region 156013
Tssr156014 19 33961157 to 33961162 5 + TSS region transcription start site region 156014
Tssr156015 19 33961184 to 33961187 3 + TSS region transcription start site region 156015
Tssr156016 19 33961195 to 33961210 15 + TSS region transcription start site region 156016
Tssr156017 19 33961214 to 33961255 41 + TSS region transcription start site region 156017
Lipf 19 33961248 to 33976813 15565 + protein coding gene lipase, gastric
Tssr156018 19 33964540 to 33964552 12 + TSS region transcription start site region 156018
Tssr156019 19 33964845 to 33964855 10 + TSS region transcription start site region 156019
Tssr5488 19 33965649 to 33965650 1 + TSS region transcription start site region 5488
Tssr158918 19 33966909 to 33966922 13 - TSS region transcription start site region 158918
Tssr156020 19 33968763 to 33968774 11 + TSS region transcription start site region 156020
Tssr156021 19 33970756 to 33970761 5 + TSS region transcription start site region 156021
Tssr156022 19 33970770 to 33970778 8 + TSS region transcription start site region 156022
Tssr156023 19 33970818 to 33970830 12 + TSS region transcription start site region 156023
Tssr156024 19 33973020 to 33973066 46 + TSS region transcription start site region 156024
Tssr156025 19 33976469 to 33976478 9 + TSS region transcription start site region 156025
Tssr156026 19 33976718 to 33976732 14 + TSS region transcription start site region 156026