Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:32792501-35712523

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386 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tgct3 19 22006727 to 32935319 10928592 QTL testicular germ cell tumor 3
Tgct4 19 27794585 to 35317981 7523396 QTL testicular germ cell tumor 4
Pten 19 32757577 to 32826160 68583 + protein coding gene phosphatase and tensin homolog
D19Mit64 19 32796630 to 32796722 92 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 64
Tssr156002 19 32800048 to 32800066 18 + TSS region transcription start site region 156002
Tssr156003 19 32805445 to 32805449 4 + TSS region transcription start site region 156003
Tssr156004 19 32815478 to 32815499 21 + TSS region transcription start site region 156004
Tssr156005 19 32817967 to 32817982 15 + TSS region transcription start site region 156005
Tssr156006 19 32820119 to 32820123 4 + TSS region transcription start site region 156006
Tssr158901 19 32906184 to 32906205 21 - TSS region transcription start site region 158901
Gm36774 19 32933345 to 32939008 5663 + lncRNA gene predicted gene, 36774
Alcp23 19 32935207 to 32935319 112 QTL alcohol preference locus 23, male specific
D19Mit46 19 32935207 to 32935319 112 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 46
Alcp24 19 32935207 to 32935319 112 QTL alcohol preference locus 24, female specific
Tssr156007 19 32952631 to 32952658 27 + TSS region transcription start site region 156007
Tssr158902 19 32956542 to 32956543 1 - TSS region transcription start site region 158902
Tssr158903 19 32957018 to 32957035 17 - TSS region transcription start site region 158903
Tssr158904 19 32957036 to 32957062 26 - TSS region transcription start site region 158904
Gm36914 19 32959987 to 32976159 16172 + lncRNA gene predicted gene, 36914
Tssr156008 19 32960130 to 32960171 41 + TSS region transcription start site region 156008
Gm36860 19 32966066 to 32980390 14324 - lncRNA gene predicted gene, 36860
Gm22482 19 32969950 to 32970308 358 - unclassified non-coding RNA gene predicted gene, 22482
Tssr156009 19 32975547 to 32975551 4 + TSS region transcription start site region 156009
Tssr158905 19 32980239 to 32980250 11 - TSS region transcription start site region 158905
Tssr158906 19 32980262 to 32980280 18 - TSS region transcription start site region 158906
Tssr158907 19 32980284 to 32980305 21 - TSS region transcription start site region 158907
Tssr156010 19 32987931 to 32987972 41 + TSS region transcription start site region 156010
Tssr158908 19 33012820 to 33012854 34 - TSS region transcription start site region 158908
Gm41835 19 33039471 to 33074928 35457 - lncRNA gene predicted gene, 41835
Gm29863 19 33085781 to 33102161 16380 + lncRNA gene predicted gene, 29863
Tssr158909 19 33108202 to 33108206 4 - TSS region transcription start site region 158909
Tssr156011 19 33115413 to 33115416 3 + TSS region transcription start site region 156011
Gm29946 19 33122661 to 33133603 10942 + lncRNA gene predicted gene, 29946
Rnls 19 33137747 to 33392295 254548 - polymorphic pseudogene renalase, FAD-dependent amine oxidase
Mir3970 19 33157112 to 33157201 89 + miRNA gene microRNA 3970
Tssr158910 19 33177180 to 33177182 2 - TSS region transcription start site region 158910
Tssr158911 19 33224307 to 33224314 7 - TSS region transcription start site region 158911
D19Mit81 19 33297097 to 33297197 100 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 81
Gm17842 19 33353066 to 33354120 1054 - pseudogene predicted gene, 17842
Cpgi10763 19 33391656 to 33392279 623 CpG island CpG island 10763
Tssr156012 19 33391795 to 33391844 49 + TSS region transcription start site region 156012
Tssr158912 19 33392095 to 33392119 24 - TSS region transcription start site region 158912
Tssr158913 19 33392231 to 33392242 11 - TSS region transcription start site region 158913
Tssr158914 19 33392255 to 33392300 45 - TSS region transcription start site region 158914
Gm29998 19 33392433 to 33420370 27937 + lncRNA gene predicted gene, 29998
Gm7237 19 33409131 to 33420642 11511 - lincRNA gene predicted gene 7237
Gm19724 19 33447613 to 33447798 185 - pseudogene predicted gene, 19724
Tssr158915 19 33447795 to 33447807 12 - TSS region transcription start site region 158915
Lipo5 19 33460123 to 33473181 13058 - protein coding gene lipase, member O5
Lipo4 19 33499049 to 33517770 18721 - protein coding gene lipase, member O4
Lipo3 19 33555160 to 33590644 35484 - protein coding gene lipase, member O3
1700001A13Rik 19 33589970 to 33590998 1028 unclassified gene RIKEN cDNA 1700001A13 gene
Gm27440 19 33592607 to 33592713 106 - miRNA gene predicted gene, 27440
Gm8978 19 33613149 to 33625249 12100 - sense intronic lncRNA gene predicted gene 8978
Tssr158916 19 33626338 to 33626345 7 - TSS region transcription start site region 158916
Gm19755 19 33668266 to 33668463 197 - pseudogene predicted gene, 19755
Gm18293 19 33673331 to 33673928 597 - pseudogene predicted gene, 18293
Gm8980 19 33674173 to 33688481 14308 - pseudogene predicted gene 8980
Lipo2 19 33719670 to 33762109 42439 - protein coding gene lipase, member O2
Lipo1 19 33776037 to 33787452 11415 - protein coding gene lipase, member O1
Tssr158917 19 33788543 to 33788583 40 - TSS region transcription start site region 158917
Gm5519 19 33822908 to 33825071 2163 + pseudogene predicted pseudogene 5519
Gm8988 19 33838827 to 33842598 3771 - pseudogene predicted gene 8988
Gm23095 19 33954235 to 33954341 106 + snRNA gene predicted gene, 23095
Tssr156013 19 33961149 to 33961154 5 + TSS region transcription start site region 156013
Tssr156014 19 33961157 to 33961162 5 + TSS region transcription start site region 156014
Tssr156015 19 33961184 to 33961187 3 + TSS region transcription start site region 156015
Tssr156016 19 33961195 to 33961210 15 + TSS region transcription start site region 156016
Tssr156017 19 33961214 to 33961255 41 + TSS region transcription start site region 156017
Lipf 19 33961248 to 33976813 15565 + protein coding gene lipase, gastric
Tssr156018 19 33964540 to 33964552 12 + TSS region transcription start site region 156018
Tssr156019 19 33964845 to 33964855 10 + TSS region transcription start site region 156019
Tssr5488 19 33965649 to 33965650 1 + TSS region transcription start site region 5488
Tssr158918 19 33966909 to 33966922 13 - TSS region transcription start site region 158918
Tssr156020 19 33968763 to 33968774 11 + TSS region transcription start site region 156020
Tssr156021 19 33970756 to 33970761 5 + TSS region transcription start site region 156021
Tssr156022 19 33970770 to 33970778 8 + TSS region transcription start site region 156022
Tssr156023 19 33970818 to 33970830 12 + TSS region transcription start site region 156023
Tssr156024 19 33973020 to 33973066 46 + TSS region transcription start site region 156024
Tssr156025 19 33976469 to 33976478 9 + TSS region transcription start site region 156025
Tssr156026 19 33976718 to 33976732 14 + TSS region transcription start site region 156026
Tssr156027 19 34008247 to 34008269 22 + TSS region transcription start site region 156027
Tssr156028 19 34008284 to 34008295 11 + TSS region transcription start site region 156028
Lipk 19 34008290 to 34047835 39545 + protein coding gene lipase, family member K
Tssr156029 19 34008300 to 34008310 10 + TSS region transcription start site region 156029
Tssr156030 19 34008323 to 34008338 15 + TSS region transcription start site region 156030
Tssr158919 19 34008356 to 34008367 11 - TSS region transcription start site region 158919
Gm31300 19 34056305 to 34058360 2055 - lncRNA gene predicted gene, 31300
Tssr156031 19 34067346 to 34067362 16 + TSS region transcription start site region 156031
Lipn 19 34067358 to 34084918 17560 + protein coding gene lipase, family member N
Tssr156032 19 34067390 to 34067402 12 + TSS region transcription start site region 156032
Tssr156033 19 34067525 to 34067534 9 + TSS region transcription start site region 156033
Gm23334 19 34068931 to 34069054 123 + miRNA gene predicted gene, 23334
Tssr156034 19 34085174 to 34085181 7 + TSS region transcription start site region 156034
Tssr156035 19 34085296 to 34085307 11 + TSS region transcription start site region 156035
Tssr156036 19 34085370 to 34085382 12 + TSS region transcription start site region 156036
Tssr156037 19 34085450 to 34085464 14 + TSS region transcription start site region 156037
Tssr156038 19 34085477 to 34085486 9 + TSS region transcription start site region 156038
Tssr156039 19 34085542 to 34085554 12 + TSS region transcription start site region 156039
Tssr156040 19 34085574 to 34085584 10 + TSS region transcription start site region 156040
Tssr156041 19 34085623 to 34085640 17 + TSS region transcription start site region 156041
Lipm 19 34100943 to 34122687 21744 + protein coding gene lipase, family member M
Tssr156042 19 34100955 to 34100983 28 + TSS region transcription start site region 156042
Tssr156043 19 34101005 to 34101016 11 + TSS region transcription start site region 156043
Tssr156044 19 34101071 to 34101085 14 + TSS region transcription start site region 156044
Tssr156045 19 34101114 to 34101125 11 + TSS region transcription start site region 156045
Ankrd22 19 34122549 to 34166041 43492 - protein coding gene ankyrin repeat domain 22
Tssr158920 19 34165917 to 34165951 34 - TSS region transcription start site region 158920
Tssr158921 19 34165961 to 34165992 31 - TSS region transcription start site region 158921
Tssr5489 19 34165995 to 34166003 8 - TSS region transcription start site region 5489
Tssr158922 19 34166013 to 34166030 17 - TSS region transcription start site region 158922
Tssr158923 19 34166037 to 34166092 55 - TSS region transcription start site region 158923
Tssr156046 19 34181444 to 34181453 9 + TSS region transcription start site region 156046
Cpgi10764 19 34192107 to 34192912 805 CpG island CpG island 10764
Stambpl1 19 34192229 to 34240333 48104 + protein coding gene STAM binding protein like 1
Tssr156047 19 34192240 to 34192266 26 + TSS region transcription start site region 156047
Tssr156048 19 34192270 to 34192290 20 + TSS region transcription start site region 156048
Tssr156049 19 34192331 to 34192344 13 + TSS region transcription start site region 156049
Tssr156050 19 34192363 to 34192377 14 + TSS region transcription start site region 156050
Tssr158924 19 34192582 to 34192620 38 - TSS region transcription start site region 158924
Tssr156051 19 34192688 to 34192723 35 + TSS region transcription start site region 156051
Tssr156052 19 34192732 to 34192743 11 + TSS region transcription start site region 156052
Tssr156053 19 34192795 to 34192808 13 + TSS region transcription start site region 156053
Tssr156054 19 34192816 to 34192827 11 + TSS region transcription start site region 156054
Tssr156055 19 34193252 to 34193312 60 + TSS region transcription start site region 156055
Tssr156056 19 34206393 to 34206394 1 + TSS region transcription start site region 156056
Tssr156057 19 34217195 to 34217227 32 + TSS region transcription start site region 156057
Tssr156058 19 34217231 to 34217254 23 + TSS region transcription start site region 156058
Tssr156059 19 34217257 to 34217268 11 + TSS region transcription start site region 156059
Tssr156060 19 34217446 to 34217451 5 + TSS region transcription start site region 156060
Tssr156061 19 34217588 to 34217603 15 + TSS region transcription start site region 156061
Tssr156062 19 34232609 to 34232614 5 + TSS region transcription start site region 156062
Tssr156063 19 34232629 to 34232662 33 + TSS region transcription start site region 156063
Acta2 19 34241090 to 34255336 14246 - protein coding gene actin, alpha 2, smooth muscle, aorta
Tssr158925 19 34241655 to 34241684 29 - TSS region transcription start site region 158925
Tssr158926 19 34241689 to 34241700 11 - TSS region transcription start site region 158926
Tssr156064 19 34241692 to 34241709 17 + TSS region transcription start site region 156064
Tssr156065 19 34241765 to 34241791 26 + TSS region transcription start site region 156065
Tssr158927 19 34243343 to 34243361 18 - TSS region transcription start site region 158927
Tssr156066 19 34243402 to 34243436 34 + TSS region transcription start site region 156066
Tssr158928 19 34243457 to 34243500 43 - TSS region transcription start site region 158928
Tssr156067 19 34243458 to 34243472 14 + TSS region transcription start site region 156067
Tssr156068 19 34244940 to 34244973 33 + TSS region transcription start site region 156068
Tssr158929 19 34244946 to 34244965 19 - TSS region transcription start site region 158929
Tssr158930 19 34244991 to 34245039 48 - TSS region transcription start site region 158930
Tssr158931 19 34245084 to 34245106 22 - TSS region transcription start site region 158931
Tssr158932 19 34246135 to 34246144 9 - TSS region transcription start site region 158932
Tssr158933 19 34246149 to 34246154 5 - TSS region transcription start site region 158933
Tssr156069 19 34246170 to 34246212 42 + TSS region transcription start site region 156069
Tssr158934 19 34246176 to 34246191 15 - TSS region transcription start site region 158934
Tssr158935 19 34246702 to 34246731 29 - TSS region transcription start site region 158935
Tssr158936 19 34248044 to 34248048 4 - TSS region transcription start site region 158936
Tssr156070 19 34248424 to 34248449 25 + TSS region transcription start site region 156070
Tssr158937 19 34248454 to 34248543 89 - TSS region transcription start site region 158937
Tssr156071 19 34248497 to 34248508 11 + TSS region transcription start site region 156071
Tssr158938 19 34248668 to 34248685 17 - TSS region transcription start site region 158938
Tssr5490 19 34248686 to 34248702 16 - TSS region transcription start site region 5490
Tssr158939 19 34249256 to 34249260 4 - TSS region transcription start site region 158939
Tssr158940 19 34249331 to 34249359 28 - TSS region transcription start site region 158940
Tssr158941 19 34251072 to 34251078 6 - TSS region transcription start site region 158941
Tssr156072 19 34251726 to 34251741 15 + TSS region transcription start site region 156072
Tssr156073 19 34251742 to 34251802 60 + TSS region transcription start site region 156073
Tssr158942 19 34251776 to 34251821 45 - TSS region transcription start site region 158942
Tssr156074 19 34251804 to 34251819 15 + TSS region transcription start site region 156074
Tssr158943 19 34251833 to 34251840 7 - TSS region transcription start site region 158943
Tssr158944 19 34251849 to 34251861 12 - TSS region transcription start site region 158944
Tssr158945 19 34252448 to 34252467 19 - TSS region transcription start site region 158945
Tssr158946 19 34252469 to 34252494 25 - TSS region transcription start site region 158946
Tssr158947 19 34252501 to 34252523 22 - TSS region transcription start site region 158947
Tssr158948 19 34252526 to 34252547 21 - TSS region transcription start site region 158948
Tssr158949 19 34252558 to 34252574 16 - TSS region transcription start site region 158949
Tssr5491 19 34252582 to 34252591 9 - TSS region transcription start site region 5491
Tssr158950 19 34254201 to 34254260 59 - TSS region transcription start site region 158950
Tssr158951 19 34255325 to 34255342 17 - TSS region transcription start site region 158951
Gm31355 19 34256636 to 34278225 21589 - lncRNA gene predicted gene, 31355
D19Mit87 19 34280075 to 34280223 148 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 87
Cpgi10765 19 34290588 to 34290859 271 CpG island CpG island 10765
Tssr156075 19 34290653 to 34290668 15 + TSS region transcription start site region 156075
Fas 19 34290659 to 34327770 37111 + protein coding gene Fas (TNF receptor superfamily member 6)
Tssr156076 19 34290670 to 34290716 46 + TSS region transcription start site region 156076
Tssr156077 19 34292402 to 34292406 4 + TSS region transcription start site region 156077
Gm27818 19 34294137 to 34294295 158 + unclassified non-coding RNA gene predicted gene, 27818
Tssr156078 19 34307024 to 34307049 25 + TSS region transcription start site region 156078
Tssr156079 19 34309985 to 34309987 2 + TSS region transcription start site region 156079
Tssr156080 19 34313700 to 34313708 8 + TSS region transcription start site region 156080
Gm23060 19 34395647 to 34395755 108 - miRNA gene predicted gene, 23060
Ch25h 19 34473786 to 34475135 1349 - protein coding gene cholesterol 25-hydroxylase
Cpgi10766 19 34474236 to 34475126 890 CpG island CpG island 10766
Gm26902 19 34474808 to 34481546 6738 + lincRNA gene predicted gene, 26902
Tssr158952 19 34475143 to 34475151 8 - TSS region transcription start site region 158952
Cpgi10767 19 34475450 to 34475762 312 CpG island CpG island 10767
Tssr156081 19 34492316 to 34492320 4 + TSS region transcription start site region 156081
Lipa 19 34492318 to 34527474 35156 - protein coding gene lysosomal acid lipase A
Tssr156082 19 34492709 to 34492755 46 + TSS region transcription start site region 156082
Tssr158953 19 34492718 to 34492734 16 - TSS region transcription start site region 158953
Tssr156083 19 34492818 to 34492838 20 + TSS region transcription start site region 156083
Tssr156084 19 34492840 to 34492855 15 + TSS region transcription start site region 156084
Tssr158954 19 34492863 to 34492892 29 - TSS region transcription start site region 158954
Tssr156085 19 34492872 to 34492916 44 + TSS region transcription start site region 156085
Tssr158955 19 34492935 to 34492946 11 - TSS region transcription start site region 158955