Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:32622747-33907295

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115 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tgct3 19 22006727 to 32935319 10928592 QTL testicular germ cell tumor 3
Papss2 19 32620005 to 32667187 47182 + protein coding gene 3'-phosphoadenosine 5'-phosphosulfate synthase 2
Tssr155975 19 32637614 to 32637660 46 + TSS region transcription start site region 155975
stn 19 32639023 to 47909549 15270526 heritable phenotypic marker stunted
D19Mit13 19 32639023 to 32639270 247 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 13
Tssr155976 19 32643080 to 32643083 3 + TSS region transcription start site region 155976
Tssr155977 19 32645143 to 32645160 17 + TSS region transcription start site region 155977
Tssr155978 19 32649135 to 32649139 4 + TSS region transcription start site region 155978
Gm36492 19 32658479 to 32660200 1721 - pseudogene predicted gene, 36492
Tssr155979 19 32665429 to 32665438 9 + TSS region transcription start site region 155979
Tssr155980 19 32665475 to 32665515 40 + TSS region transcription start site region 155980
Tssr155981 19 32665516 to 32665595 79 + TSS region transcription start site region 155981
Tssr155982 19 32665605 to 32665612 7 + TSS region transcription start site region 155982
Tssr155983 19 32665613 to 32665643 30 + TSS region transcription start site region 155983
Tssr155984 19 32665765 to 32665785 20 + TSS region transcription start site region 155984
Tssr155985 19 32665792 to 32665821 29 + TSS region transcription start site region 155985
Tssr155986 19 32665847 to 32665914 67 + TSS region transcription start site region 155986
Tssr155987 19 32665916 to 32665935 19 + TSS region transcription start site region 155987
Tssr155988 19 32666029 to 32666040 11 + TSS region transcription start site region 155988
Tssr5484 19 32666358 to 32666371 13 + TSS region transcription start site region 5484
Atad1 19 32672563 to 32712298 39735 - protein coding gene ATPase family, AAA domain containing 1
Tssr158887 19 32673501 to 32673518 17 - TSS region transcription start site region 158887
Tssr158888 19 32673854 to 32673866 12 - TSS region transcription start site region 158888
Tssr158889 19 32682843 to 32682847 4 - TSS region transcription start site region 158889
Tssr158890 19 32706871 to 32706892 21 - TSS region transcription start site region 158890
Cpgi10761 19 32711796 to 32712586 790 CpG island CpG island 10761
Tssr158891 19 32712287 to 32712336 49 - TSS region transcription start site region 158891
Tssr158892 19 32712337 to 32712340 3 - TSS region transcription start site region 158892
Tssr158893 19 32712350 to 32712359 9 - TSS region transcription start site region 158893
Tssr155989 19 32712380 to 32712417 37 + TSS region transcription start site region 155989
Tssr158894 19 32712746 to 32712760 14 - TSS region transcription start site region 158894
Tssr158895 19 32712830 to 32712843 13 - TSS region transcription start site region 158895
Tssr155990 19 32727299 to 32727308 9 + TSS region transcription start site region 155990
Tssr158896 19 32739740 to 32739756 16 - TSS region transcription start site region 158896
Tssr158897 19 32739768 to 32739793 25 - TSS region transcription start site region 158897
Gm36566 19 32754378 to 32756612 2234 - protein coding gene predicted gene, 36566
Tssr155991 19 32754916 to 32754921 5 + TSS region transcription start site region 155991
Cpgi10762 19 32756037 to 32758510 2473 CpG island CpG island 10762
Tssr158898 19 32756409 to 32756426 17 - TSS region transcription start site region 158898
Tssr158899 19 32757322 to 32757338 16 - TSS region transcription start site region 158899
Tssr158900 19 32757369 to 32757383 14 - TSS region transcription start site region 158900
Tssr5485 19 32757484 to 32757500 16 + TSS region transcription start site region 5485
Tssr155992 19 32757576 to 32757587 11 + TSS region transcription start site region 155992
Pten 19 32757577 to 32826160 68583 + protein coding gene phosphatase and tensin homolog
Tssr155993 19 32757604 to 32757637 33 + TSS region transcription start site region 155993
Tssr155994 19 32757647 to 32757659 12 + TSS region transcription start site region 155994
Tssr5486 19 32757680 to 32757695 15 + TSS region transcription start site region 5486
Tssr5487 19 32757726 to 32757735 9 + TSS region transcription start site region 5487
Tssr155995 19 32758325 to 32758411 86 + TSS region transcription start site region 155995
Tssr155996 19 32762110 to 32762114 4 + TSS region transcription start site region 155996
Tssr155997 19 32765102 to 32765107 5 + TSS region transcription start site region 155997
Tssr155998 19 32776033 to 32776053 20 + TSS region transcription start site region 155998
Tssr155999 19 32778161 to 32778165 4 + TSS region transcription start site region 155999
Tssr156000 19 32787067 to 32787071 4 + TSS region transcription start site region 156000
Tssr156001 19 32792203 to 32792209 6 + TSS region transcription start site region 156001
D19Mit64 19 32796630 to 32796722 92 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 64
Tssr156002 19 32800048 to 32800066 18 + TSS region transcription start site region 156002
Tssr156003 19 32805445 to 32805449 4 + TSS region transcription start site region 156003
Tssr156004 19 32815478 to 32815499 21 + TSS region transcription start site region 156004
Tssr156005 19 32817967 to 32817982 15 + TSS region transcription start site region 156005
Tssr156006 19 32820119 to 32820123 4 + TSS region transcription start site region 156006
Tssr158901 19 32906184 to 32906205 21 - TSS region transcription start site region 158901
Gm36774 19 32933345 to 32939008 5663 + lncRNA gene predicted gene, 36774
Alcp24 19 32935207 to 32935319 112 QTL alcohol preference locus 24, female specific
D19Mit46 19 32935207 to 32935319 112 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 46
Alcp23 19 32935207 to 32935319 112 QTL alcohol preference locus 23, male specific
Tssr156007 19 32952631 to 32952658 27 + TSS region transcription start site region 156007
Tssr158902 19 32956542 to 32956543 1 - TSS region transcription start site region 158902
Tssr158903 19 32957018 to 32957035 17 - TSS region transcription start site region 158903
Tssr158904 19 32957036 to 32957062 26 - TSS region transcription start site region 158904
Gm36914 19 32959987 to 32976159 16172 + lncRNA gene predicted gene, 36914
Tssr156008 19 32960130 to 32960171 41 + TSS region transcription start site region 156008
Gm36860 19 32966066 to 32980390 14324 - lncRNA gene predicted gene, 36860
Gm22482 19 32969950 to 32970308 358 - unclassified non-coding RNA gene predicted gene, 22482
Tssr156009 19 32975547 to 32975551 4 + TSS region transcription start site region 156009
Tssr158905 19 32980239 to 32980250 11 - TSS region transcription start site region 158905
Tssr158906 19 32980262 to 32980280 18 - TSS region transcription start site region 158906
Tssr158907 19 32980284 to 32980305 21 - TSS region transcription start site region 158907
Tssr156010 19 32987931 to 32987972 41 + TSS region transcription start site region 156010
Tssr158908 19 33012820 to 33012854 34 - TSS region transcription start site region 158908
Gm41835 19 33039471 to 33074928 35457 - lncRNA gene predicted gene, 41835
Gm29863 19 33085781 to 33102161 16380 + lncRNA gene predicted gene, 29863
Tssr158909 19 33108202 to 33108206 4 - TSS region transcription start site region 158909
Tssr156011 19 33115413 to 33115416 3 + TSS region transcription start site region 156011
Gm29946 19 33122661 to 33133603 10942 + lncRNA gene predicted gene, 29946
Rnls 19 33137747 to 33392295 254548 - polymorphic pseudogene renalase, FAD-dependent amine oxidase
Mir3970 19 33157112 to 33157201 89 + miRNA gene microRNA 3970
Tssr158910 19 33177180 to 33177182 2 - TSS region transcription start site region 158910
Tssr158911 19 33224307 to 33224314 7 - TSS region transcription start site region 158911
D19Mit81 19 33297097 to 33297197 100 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 81
Gm17842 19 33353066 to 33354120 1054 - pseudogene predicted gene, 17842
Cpgi10763 19 33391656 to 33392279 623 CpG island CpG island 10763
Tssr156012 19 33391795 to 33391844 49 + TSS region transcription start site region 156012
Tssr158912 19 33392095 to 33392119 24 - TSS region transcription start site region 158912
Tssr158913 19 33392231 to 33392242 11 - TSS region transcription start site region 158913
Tssr158914 19 33392255 to 33392300 45 - TSS region transcription start site region 158914
Gm29998 19 33392433 to 33420370 27937 + lncRNA gene predicted gene, 29998
Gm7237 19 33409131 to 33420642 11511 - lincRNA gene predicted gene 7237
Gm19724 19 33447613 to 33447798 185 - pseudogene predicted gene, 19724
Tssr158915 19 33447795 to 33447807 12 - TSS region transcription start site region 158915
Lipo5 19 33460123 to 33473181 13058 - protein coding gene lipase, member O5
Lipo4 19 33499049 to 33517770 18721 - protein coding gene lipase, member O4
Lipo3 19 33555160 to 33590644 35484 - protein coding gene lipase, member O3
1700001A13Rik 19 33589970 to 33590998 1028 unclassified gene RIKEN cDNA 1700001A13 gene
Gm27440 19 33592607 to 33592713 106 - miRNA gene predicted gene, 27440
Gm8978 19 33613149 to 33625249 12100 - sense intronic lncRNA gene predicted gene 8978
Tssr158916 19 33626338 to 33626345 7 - TSS region transcription start site region 158916
Gm19755 19 33668266 to 33668463 197 - pseudogene predicted gene, 19755
Gm18293 19 33673331 to 33673928 597 - pseudogene predicted gene, 18293
Gm8980 19 33674173 to 33688481 14308 - pseudogene predicted gene 8980
Lipo2 19 33719670 to 33762109 42439 - protein coding gene lipase, member O2
Lipo1 19 33776037 to 33787452 11415 - protein coding gene lipase, member O1
Tssr158917 19 33788543 to 33788583 40 - TSS region transcription start site region 158917
Gm5519 19 33822908 to 33825071 2163 + pseudogene predicted pseudogene 5519
Gm8988 19 33838827 to 33842598 3771 - pseudogene predicted gene 8988