Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:32345769-32655370

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sgms1 19 32122727 to 32389712 266985 - protein coding gene sphingomyelin synthase 1
Tssr158872 19 32347047 to 32347059 12 - TSS region transcription start site region 158872
Tssr158873 19 32349942 to 32349945 3 - TSS region transcription start site region 158873
Tssr158874 19 32374241 to 32374246 5 - TSS region transcription start site region 158874
Cpgi10758 19 32387300 to 32389952 2652 CpG island CpG island 10758
Tssr155955 19 32387555 to 32387562 7 + TSS region transcription start site region 155955
Tssr155956 19 32387574 to 32387585 11 + TSS region transcription start site region 155956
Tssr158875 19 32387870 to 32387897 27 - TSS region transcription start site region 158875
Tssr158876 19 32388005 to 32388019 14 - TSS region transcription start site region 158876
Tssr158877 19 32388084 to 32388093 9 - TSS region transcription start site region 158877
Tssr158878 19 32388410 to 32388419 9 - TSS region transcription start site region 158878
Tssr158879 19 32388428 to 32388461 33 - TSS region transcription start site region 158879
Tssr158880 19 32388462 to 32388483 21 - TSS region transcription start site region 158880
Tssr155957 19 32388518 to 32388530 12 + TSS region transcription start site region 155957
Tssr155958 19 32389202 to 32389257 55 + TSS region transcription start site region 155958
2700046G09Rik 19 32389216 to 32391184 1968 + lincRNA gene RIKEN cDNA 2700046G09 gene
Tssr5482 19 32389425 to 32389464 39 + TSS region transcription start site region 5482
Tssr158881 19 32389656 to 32389663 7 - TSS region transcription start site region 158881
Tssr158882 19 32389678 to 32389702 24 - TSS region transcription start site region 158882
Tssr158883 19 32389866 to 32389890 24 - TSS region transcription start site region 158883
Tssr158884 19 32389902 to 32389909 7 - TSS region transcription start site region 158884
Gm38616 19 32423192 to 32423582 390 + pseudogene predicted gene, 38616
Gm9563 19 32439941 to 32440687 746 - pseudogene predicted gene 9563
Rpl9-ps6 19 32465885 to 32466575 690 - pseudogene ribosomal protein L9, pseudogene 6
Gm46659 19 32470601 to 32483595 12994 - lncRNA gene predicted gene, 46659
Tssr5483 19 32472865 to 32472869 4 + TSS region transcription start site region 5483
Cpgi10759 19 32485458 to 32486794 1336 CpG island CpG island 10759
Tssr155959 19 32485725 to 32485735 10 + TSS region transcription start site region 155959
Tssr155960 19 32485751 to 32485774 23 + TSS region transcription start site region 155960
Minpp1 19 32485769 to 32515370 29601 + protein coding gene multiple inositol polyphosphate histidine phosphatase 1
Tssr155961 19 32485787 to 32485802 15 + TSS region transcription start site region 155961
Tssr158885 19 32485823 to 32485841 18 - TSS region transcription start site region 158885
Tssr158886 19 32485850 to 32485868 18 - TSS region transcription start site region 158886
Tssr155962 19 32485883 to 32485984 101 + TSS region transcription start site region 155962
Tssr155963 19 32491272 to 32491293 21 + TSS region transcription start site region 155963
Tssr155964 19 32491301 to 32491312 11 + TSS region transcription start site region 155964
Tssr155965 19 32543324 to 32543335 11 + TSS region transcription start site region 155965
Gm36419 19 32543347 to 32563047 19700 + lncRNA gene predicted gene, 36419
Tssr155966 19 32543428 to 32543450 22 + TSS region transcription start site region 155966
Tssr155967 19 32543460 to 32543472 12 + TSS region transcription start site region 155967
D19Dcr25 19 32565954 to 32566050 96 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 25
Cpgi10760 19 32595339 to 32596325 986 CpG island CpG island 10760
Tssr155968 19 32595413 to 32595448 35 + TSS region transcription start site region 155968
Tssr155969 19 32595727 to 32595745 18 + TSS region transcription start site region 155969
Tssr155970 19 32595752 to 32595780 28 + TSS region transcription start site region 155970
Tssr155971 19 32595782 to 32595799 17 + TSS region transcription start site region 155971
Tssr155972 19 32619979 to 32619996 17 + TSS region transcription start site region 155972
Tssr155973 19 32619997 to 32620031 34 + TSS region transcription start site region 155973
Papss2 19 32620005 to 32667187 47182 + protein coding gene 3'-phosphoadenosine 5'-phosphosulfate synthase 2
Tssr155974 19 32620048 to 32620060 12 + TSS region transcription start site region 155974
Tssr155975 19 32637614 to 32637660 46 + TSS region transcription start site region 155975
stn 19 32639023 to 47909549 15270526 heritable phenotypic marker stunted
D19Mit13 19 32639023 to 32639270 247 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 13
Tssr155976 19 32643080 to 32643083 3 + TSS region transcription start site region 155976
Tssr155977 19 32645143 to 32645160 17 + TSS region transcription start site region 155977
Tssr155978 19 32649135 to 32649139 4 + TSS region transcription start site region 155978