Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:32188462-32588483

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66 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sgms1 19 32122727 to 32389712 266985 - protein coding gene sphingomyelin synthase 1
Tssr158856 19 32196363 to 32196377 14 - TSS region transcription start site region 158856
Tssr158857 19 32196393 to 32196411 18 - TSS region transcription start site region 158857
Tssr158858 19 32196423 to 32196442 19 - TSS region transcription start site region 158858
Tssr158859 19 32210133 to 32210144 11 - TSS region transcription start site region 158859
Cpgi10757 19 32210656 to 32211130 474 CpG island CpG island 10757
Tssr158860 19 32210969 to 32211002 33 - TSS region transcription start site region 158860
Tssr158861 19 32211016 to 32211036 20 - TSS region transcription start site region 158861
Tssr158862 19 32223785 to 32223820 35 - TSS region transcription start site region 158862
Tssr155950 19 32224204 to 32224207 3 + TSS region transcription start site region 155950
Tssr155951 19 32224544 to 32224548 4 + TSS region transcription start site region 155951
Tssr158863 19 32238796 to 32238838 42 - TSS region transcription start site region 158863
Tssr158864 19 32239005 to 32239053 48 - TSS region transcription start site region 158864
Tssr158865 19 32242269 to 32242280 11 - TSS region transcription start site region 158865
Tssr158866 19 32255094 to 32255109 15 - TSS region transcription start site region 158866
Tssr155952 19 32255228 to 32255265 37 + TSS region transcription start site region 155952
Tssr158867 19 32257204 to 32257239 35 - TSS region transcription start site region 158867
Tssr5480 19 32258246 to 32258249 3 + TSS region transcription start site region 5480
Tssr158868 19 32259954 to 32259967 13 - TSS region transcription start site region 158868
Tssr155953 19 32263113 to 32263115 2 + TSS region transcription start site region 155953
Tssr158869 19 32276927 to 32276938 11 - TSS region transcription start site region 158869
Tssr158870 19 32276943 to 32276956 13 - TSS region transcription start site region 158870
Tssr5481 19 32276962 to 32276965 3 - TSS region transcription start site region 5481
Tssr155954 19 32295860 to 32295864 4 + TSS region transcription start site region 155954
D19Mit134 19 32315855 to 32315976 121 DNA segment DNA Segment, Chr 19, Massachusetts Institute of Technology 134
Tssr158871 19 32323199 to 32323234 35 - TSS region transcription start site region 158871
Tssr158872 19 32347047 to 32347059 12 - TSS region transcription start site region 158872
Tssr158873 19 32349942 to 32349945 3 - TSS region transcription start site region 158873
Tssr158874 19 32374241 to 32374246 5 - TSS region transcription start site region 158874
Cpgi10758 19 32387300 to 32389952 2652 CpG island CpG island 10758
Tssr155955 19 32387555 to 32387562 7 + TSS region transcription start site region 155955
Tssr155956 19 32387574 to 32387585 11 + TSS region transcription start site region 155956
Tssr158875 19 32387870 to 32387897 27 - TSS region transcription start site region 158875
Tssr158876 19 32388005 to 32388019 14 - TSS region transcription start site region 158876
Tssr158877 19 32388084 to 32388093 9 - TSS region transcription start site region 158877
Tssr158878 19 32388410 to 32388419 9 - TSS region transcription start site region 158878
Tssr158879 19 32388428 to 32388461 33 - TSS region transcription start site region 158879
Tssr158880 19 32388462 to 32388483 21 - TSS region transcription start site region 158880
Tssr155957 19 32388518 to 32388530 12 + TSS region transcription start site region 155957
Tssr155958 19 32389202 to 32389257 55 + TSS region transcription start site region 155958
2700046G09Rik 19 32389216 to 32391184 1968 + lincRNA gene RIKEN cDNA 2700046G09 gene
Tssr5482 19 32389425 to 32389464 39 + TSS region transcription start site region 5482
Tssr158881 19 32389656 to 32389663 7 - TSS region transcription start site region 158881
Tssr158882 19 32389678 to 32389702 24 - TSS region transcription start site region 158882
Tssr158883 19 32389866 to 32389890 24 - TSS region transcription start site region 158883
Tssr158884 19 32389902 to 32389909 7 - TSS region transcription start site region 158884
Gm38616 19 32423192 to 32423582 390 + pseudogene predicted gene, 38616
Gm9563 19 32439941 to 32440687 746 - pseudogene predicted gene 9563
Rpl9-ps6 19 32465885 to 32466575 690 - pseudogene ribosomal protein L9, pseudogene 6
Gm46659 19 32470601 to 32483595 12994 - lncRNA gene predicted gene, 46659
Tssr5483 19 32472865 to 32472869 4 + TSS region transcription start site region 5483
Cpgi10759 19 32485458 to 32486794 1336 CpG island CpG island 10759
Tssr155959 19 32485725 to 32485735 10 + TSS region transcription start site region 155959
Tssr155960 19 32485751 to 32485774 23 + TSS region transcription start site region 155960
Minpp1 19 32485769 to 32515370 29601 + protein coding gene multiple inositol polyphosphate histidine phosphatase 1
Tssr155961 19 32485787 to 32485802 15 + TSS region transcription start site region 155961
Tssr158885 19 32485823 to 32485841 18 - TSS region transcription start site region 158885
Tssr158886 19 32485850 to 32485868 18 - TSS region transcription start site region 158886
Tssr155962 19 32485883 to 32485984 101 + TSS region transcription start site region 155962
Tssr155963 19 32491272 to 32491293 21 + TSS region transcription start site region 155963
Tssr155964 19 32491301 to 32491312 11 + TSS region transcription start site region 155964
Tssr155965 19 32543324 to 32543335 11 + TSS region transcription start site region 155965
Gm36419 19 32543347 to 32563047 19700 + lncRNA gene predicted gene, 36419
Tssr155966 19 32543428 to 32543450 22 + TSS region transcription start site region 155966
Tssr155967 19 32543460 to 32543472 12 + TSS region transcription start site region 155967
D19Dcr25 19 32565954 to 32566050 96 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 25